Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01625 ATGACAATTGCAATGGCAATGACTCTAAGGAATAAGCTCAAAACTCTTTGTTCTTGTGGGGATGGTTGGTCTTATGCCATTTTCTGGCGTTTTCATCCGCGGAATTCCTTGTTGTTGACTGTGGAAGAAGCATACTATGAAGAGCAATTGGGAGAAGATATTGCAAACTTGCTTCCACAGGTGCACTTGCTTGGAGAAGGAATTGTTGGTGAAGCTGCTCTCACGGGCAAGCACAGTTGGGTACACTCAGATACTCAAACCCAAGAATGGAATTTGACTGGGCAGCATATTTGTGAGGTTGATTCTGGATTGCATCAACAATTCTCCTCTGGGATAAAGACAATTGTGGTCATACCTGTCAAAACTTGGGGAGTGGTGCAGTTTGGATCCAGAAAGAAGATTTTGGAGGGAGTTGAATTTTTGGAGCAAACACAGAGCTTGCTCATGGAGATAGATGATACAGATATGCTTGACGCATCAGGAAACGCAGTTTTATCTCTTGATTGTGAATGTTATGATCTAGATGGGTTGTTGGCTTCCATTTCCTCTGAAAATTCATATGATTGGAACCTCAAATATGCTCATGATGAACACTCTAAAGAGCTGGGAAAGGTTTATTCTTCTGCAAGTTCCAACTATCCTTTCCCTTCCGAATATATGACTTACGAAGAAGGGATCACTTCATTGCAAGGAGATTCTTCTTGTTTAGGTGACCAATTGGAAGGTACCATAGAAGCTGAAGTTGTATTGTCAGATAGGGAGAGTACTGACGTGCTTTTGAAGCCTAACTCTTCTATGAACCACTTAATTGCCCAAACCCCCGGTTTTGGTGCATGGAGTGGTGAATTATCTTTGTTTGATTTGTTGGAGCAACAAATGGTCTCTGAAATAAGGGCACAAGAAGTCGCAGACGCGTGTTCTGCAGAAGAAAATGCATTTGCTAGTAGTAAACTATTAGTTCAGGATTCAACATTGACCTCATTGCACAGTATGAACAGAGAGCCATTTCAGGACAAATTACAAAATTTAATGGATAACCAACATTCTTCTCAATCTAGTGTTGTGACAGATGTTAATTTCCCATCGAGTTCAAACACGCTGCATGAACTCTCTAAGAGCTTAGAGCCAGTTGACATGTCAGAAGAATTTTTGAAGTTCAGCTCCATGGATGATCTTTGCCAGTGGTTTGCTCCTTCTCCAGAGGATAGTATCTGCAGAACAGTATTGGATAACACCCTTTCGGAATCAATAAAATTTAATCCCACTTCTTCTGATCAGGTTGGAAGTAGTTCTTTAAATGATATTCTAGTGACATGCCTATCTGGGCATAATTCCATCACCACTCCAGTAGATGGGAAAGAAACATCTGTAGTAATGCATAGTTCTGAAAATAGTCTCTTGGATAGCATGGAACTTGATTTGAGCTGTGATCAAGCTGATGAATGGTGGAGAAATATACTTACATCAGTGGGCAGGGCTGCTACTGATACTGGCTTTTTTGAATGCCCATCAGAGTTGAACATTGGTACAATGAATGGTACCCGGAAGAGATTATTCTCAGAGTTAGGAATTGAAGAGCTTTTGAGGGGTAAAGCTAATAACAATCCTTTCAATAGTTCTGATCTTGAGTCTGAGTTATCATCTAATAAGAGGCAGATGGTAGAATCTTCACCAATGAATAGAAATCCAATACATTTTGCAAACCTTGCAACGGCTGAGGCTAGAGCAGACTTGATGCAGCCAGTTTCTGACTTGGACAAGTCAAACAATCTTTTAAGCAAGAAAGATACATTCCCAAAATTACAAGCAGGCATGTTGATTGATGATAGCCATAGCATTAATATTAGGAGGGCTGTTCCAGTACACCTTCAAAAGCCAGAGGAGCCCACAAAACCCACCAAGAAGAGGGCTAGGCCAGGGGAGAGTAATCGACCACGACCAAAAGATCGGCAGCAGATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCCAATGGTGGAAAGTGCAGCATTGATTCTTTGTTAGACCGAACCATCAGATACATGCTTTTTTTAAGAAGTGTAATGAAGTATGCAGACAAACTACAGGAACCCAATGAGCCAAAGCTCATTGAGCAGGCAAATGGAGTGTTCTAA 2139 0.4109 MTIAMAMTLRNKLKTLCSCGDGWSYAIFWRFHPRNSLLLTVEEAYYEEQLGEDIANLLPQVHLLGEGIVGEAALTGKHSWVHSDTQTQEWNLTGQHICEVDSGLHQQFSSGIKTIVVIPVKTWGVVQFGSRKKILEGVEFLEQTQSLLMEIDDTDMLDASGNAVLSLDCECYDLDGLLASISSENSYDWNLKYAHDEHSKELGKVYSSASSNYPFPSEYMTYEEGITSLQGDSSCLGDQLEGTIEAEVVLSDRESTDVLLKPNSSMNHLIAQTPGFGAWSGELSLFDLLEQQMVSEIRAQEVADACSAEENAFASSKLLVQDSTLTSLHSMNREPFQDKLQNLMDNQHSSQSSVVTDVNFPSSSNTLHELSKSLEPVDMSEEFLKFSSMDDLCQWFAPSPEDSICRTVLDNTLSESIKFNPTSSDQVGSSSLNDILVTCLSGHNSITTPVDGKETSVVMHSSENSLLDSMELDLSCDQADEWWRNILTSVGRAATDTGFFECPSELNIGTMNGTRKRLFSELGIEELLRGKANNNPFNSSDLESELSSNKRQMVESSPMNRNPIHFANLATAEARADLMQPVSDLDKSNNLLSKKDTFPKLQAGMLIDDSHSINIRRAVPVHLQKPEEPTKPTKKRARPGESNRPRPKDRQQIQDCIKELRGIIPNGGKCSIDSLLDRTIRYMLFLRSVMKYADKLQEPNEPKLIEQANGVF* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01625 712 MobiDBLite consensus disorder prediction 619 652 - -
Rops6g01625 712 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 637 686 IPR011598 GO:0046983
Rops6g01625 712 MobiDBLite consensus disorder prediction 533 557 - -
Rops6g01625 712 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 59 147 IPR025610 -
Rops6g01625 712 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 650 692 IPR036638 GO:0046983
Rops6g01625 712 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 711 IPR043561 GO:0003700|GO:0006355
Rops6g01625 712 MobiDBLite consensus disorder prediction 621 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01625 Rops-Chr6 33265626 33269985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01625 605 707 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G64625 55.769 1.22e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01625 - - gmx:100798158 939.873