Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01599 ATGGGTGAATCAGAGTCTTCAACATCTCAATGCAACCTGAGATTGTCTTCAACAAATCCATTGTCAACATCTCAAAGATTGTTCATAGCATCGGTTACCCTACACTTTGTTGCGGTGCCCGTTGCTTCCCCCTTCATTGACAGCTTTCGCCCGCTTTGGCCCTCCGTCCAGATATCTAATACAGCAGATATTAAGTTGGTTATTTGGATCCAAGATTTCTGTCGTCTCTCTGTCATGGCATCTAGACTTCAGTTTGAGAATTCTTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCCTATTGTTTGGTTGCCATTGGAGGTTCTGAAAACTTCTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATCCCTTTGGTCAAAACCTCCATTGGTGGCACTCGTATTGTTGGTCGTCTTTGTGTTGGAAACAAGAATGGGCTTCTCTTGCCCCATACCACCACAGACCAAGAACTTCAACATTTGAGAAACAGTCTCCCTGATCAAGTTGTTGTTCAGCGCATAGAAGAAAGGTTATCTGCTCTGGGAAATTGTGTAGCATGTAATGACCATGTGGCCCTCACGCACACTGATCTTGACAGGGAAACTGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACGATTGCCGGTAATATTCTTGTCGGCAGTTACTGTGCCTTCTCCAACAGAGGTGGTTTGGTCCACCCTCACACTTCCATTGAAGACTTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTTGCGGGGACTGTCAATCGTGGTAGTGAAGTGATAGCTGCTGGCATGACAGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACGGCAACAGAACTCTCGGTGATTGAGAGTGTTTTCAAGCTGAGGGAAGCCCAGCCTAGTGCCATTGTGGATGAGATGAGGAAATCGCTCATTGATAGCTATGTCTAA 972 0.4506 MGESESSTSQCNLRLSSTNPLSTSQRLFIASVTLHFVAVPVASPFIDSFRPLWPSVQISNTADIKLVIWIQDFCRLSVMASRLQFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELADVIPLVKTSIGGTRIVGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCVACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01599 323 FunFam Eukaryotic translation initiation factor 6 79 303 - -
Rops6g01599 323 Hamap Translation initiation factor 6 [eif6]. 68 323 IPR002769 GO:0042256|GO:0043022
Rops6g01599 323 CDD IF6 80 301 IPR002769 GO:0042256|GO:0043022
Rops6g01599 323 SMART eIF6neu2 81 282 IPR002769 GO:0042256|GO:0043022
Rops6g01599 323 SUPERFAMILY Pentein 79 302 - -
Rops6g01599 323 Gene3D - 79 303 - -
Rops6g01599 323 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 79 322 IPR002769 GO:0042256|GO:0043022
Rops6g01599 323 NCBIfam translation initiation factor IF-6 82 302 IPR002769 GO:0042256|GO:0043022
Rops6g01599 323 Pfam eIF-6 family 82 281 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01599 Rops-Chr6 32903117 32911352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01599 79 323 Eukaryotic Initiation Factors Gene Family AT3G55620 90.612 6.85e-172 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01599 K03264 - gmx:100777602 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00632 5 10707947 10717210 Rops6g01599 6 32903117 32911352 PCT