Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01592 ATGCTGTACAAATCACCTGTGAAGTCTTTGAAGATGGTGATGGCTAATTTGCTGACAGTGTTTTTACTAATAGAGGACATAGTCAATAGAGCTTTGCAGGATGATCCCACCCTTGCAGCTGGTCTTATTAGAATGCACTTCCATGACTGCTTCATTGAGGGATGTGATGGGTCAGTTCTGATTGACTCCACTAAGGATAATACAGCGGAAAAGGATTCACCAGCAAATTTGAGCCTGAGAGGCTTCGAAGTCATAGATAATATCAAAGAAGAGCTTGAAGGACAATGCCCTGGCGTGGTTTCATGCGCTGATATTCTTGCTATGGCTGCTAGAGAGGCAGTTTTCTTTGCTGGAGGCCCATTGTATGACACACCTAAAGGAAGAAAGGATGGAAGAAGGTCCAAAATTGAGGACACTATCAATTTGCCATCCCCCACCTTTAATGCCTCTGAGCTCATTAGGTTGTTTGGGCAACATGGTTTTTCTGCACAAGAGATGGTGGCTCTCTCTGGGGCTCATACACTTGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAGTCAAGTGGATCCAACTTTGGATACAGAATTTGCCAACACACTGTCCAAAACATGCAGTTCTGGCGACAACGCTGAACAGCCATTCGATGCCACGAGAAACGATTTTGATAACTTTTACTTCAACACTTTGTTGTGGAGAAATGGGGTTCTTACATCAGACCAAACACTGTACACTAGCCCCAGAACCAGGAACTTTGTGAATGCTTATGCATTCAACCAAGCCATGTTCTTCCTTGATTTCCAACAAGCAATGGTGAAGATGAGCATGCTTGATGTTAAAGCAGATTCCAATGGAGAAGTGCGAGAAAATTGCCGCAAAATAAATTGA 891 0.4366 MLYKSPVKSLKMVMANLLTVFLLIEDIVNRALQDDPTLAAGLIRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGFEVIDNIKEELEGQCPGVVSCADILAMAAREAVFFAGGPLYDTPKGRKDGRRSKIEDTINLPSPTFNASELIRLFGQHGFSAQEMVALSGAHTLGVARCASFKNRLSQVDPTLDTEFANTLSKTCSSGDNAEQPFDATRNDFDNFYFNTLLWRNGVLTSDQTLYTSPRTRNFVNAYAFNQAMFFLDFQQAMVKMSMLDVKADSNGEVRENCRKIN* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01592 296 Gene3D Peroxidase, domain 2 143 275 - -
Rops6g01592 296 ProSitePatterns Peroxidases active site signature. 39 50 IPR019794 GO:0004601
Rops6g01592 296 Gene3D - 23 296 - -
Rops6g01592 296 PRINTS Plant peroxidase signature 41 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 270 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 99 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 230 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 164 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 80 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 214 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 17 36 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Plant peroxidase signature 118 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 ProSiteProfiles Plant heme peroxidase family profile. 23 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 SUPERFAMILY Heme-dependent peroxidases 20 296 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 CDD secretory_peroxidase 20 295 IPR033905 GO:0004601|GO:0042744
Rops6g01592 296 PANTHER PEROXIDASE 25-RELATED 23 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 Pfam Peroxidase 26 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 FunFam Peroxidase 143 275 - -
Rops6g01592 296 FunFam Peroxidase 18 151 - -
Rops6g01592 296 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Haem peroxidase superfamily signature 216 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Haem peroxidase superfamily signature 39 53 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Haem peroxidase superfamily signature 100 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 PRINTS Haem peroxidase superfamily signature 118 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01592 296 ProSitePatterns Peroxidases proximal heme-ligand signature. 165 175 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01592 Rops-Chr6 32818131 32818439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01592 23 296 Peroxidase AT4G33420 74.818 3.86e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01592 K00430 - gmx:100776019 513.842