Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01548 ATGGCTCGTGATGGGAGCGTTGTCCCTGCGGACCCGCAGGCCATGGCGGTTGTGAAGAAGAAGACACAGTCTTCTAGAAGTTGGATTCTGTTTGATTCCACTGGTCAAGGTTCATTGCTTGACGTGGACAAGTATGCCATCATGCATAGGGTTCAGATTCACGCACGTGATCTTAGAATCATTGATCCCTTGCTATCTTACCCCTCCACTATTCTGGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACCGCTGAAGAGGTGTTGCTGCGAGATCCAACAGATGAAAATGTGGTCCCTGTTGTTCAGGAACTGCAAAGACGATTGCCTAAAGTAAGTGCCATTCATCAACAACAAGGTGATGGTAAAGGCAGTCTTGGCGGTCAACATGATAACGAAGCAGCTGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCTTGGAGGTAGCTTTAGAAGCCATCTGTAGTTTCCTTGCTGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAGCTGAAAAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGATGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGACCTATACTTGTCAAGAAAGCTGGCAGGTTCATCATCACCAGTCAGTGGATCAGGTGCTGTAAATTGGTTTGCTGCCTCCCCTACCATAGGATCAAAGATATCCAGAGCAAGTAGAGCAAGTGTAACAACAATGCGTTTAGATGAAAATGATGTGGAAGAACTTGAAATGCTACTCGAGGCTTATTTCATGCAAATTGATGGCACATTGAACAAATTAACCACACTGCGAGAATATATTGATGATACTGAAGATTATATTAATATTCAACTTGACAGCCATCGTAATCAGCTGATTCAGTTAGAGCTCTTTCTTAGCTCAGGAACTGTTTGTCTAGCTTTCTACGCTTTGGTGACCTCTATTTTTGGCATGAATATCCCATACAGTTGGAATGGTAACCATGGTTACATGTTCAAATGGGTAGTTATTGTCACAGGAACATTTTCTGCTGCCATGTTTCTCATGATTACTTTCTATGCTCGCAAAAAGGGGTTGGTTGGATCATGA 1185 0.4338 MARDGSVVPADPQAMAVVKKKTQSSRSWILFDSTGQGSLLDVDKYAIMHRVQIHARDLRIIDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVVPVVQELQRRLPKVSAIHQQQGDGKGSLGGQHDNEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLAGSSSPVSGSGAVNWFAASPTIGSKISRASRASVTTMRLDENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDSHRNQLIQLELFLSSGTVCLAFYALVTSIFGMNIPYSWNGNHGYMFKWVVIVTGTFSAAMFLMITFYARKKGLVGS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01548 394 FunFam Magnesium transporter MRS2-1 16 99 - -
Rops6g01548 394 Gene3D Magnesium transport protein CorA, transmembrane region 104 324 - -
Rops6g01548 394 Coils Coil 194 221 - -
Rops6g01548 394 Gene3D - 13 99 - -
Rops6g01548 394 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 330 382 IPR045863 -
Rops6g01548 394 CDD Mrs2_Mfm1p-like 28 391 IPR039204 -
Rops6g01548 394 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 392 IPR039204 -
Rops6g01548 394 Pfam CorA-like Mg2+ transporter protein 269 382 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops6g01548 394 MobiDBLite consensus disorder prediction 119 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01548 Rops-Chr6 32258235 32266622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01548 1 367 MRS2 Gene Family AT5G64560 79.620 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01548 K16075 - gmx:100810239 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01548 6 32258235 32266622 Rops6g01548 6 32258235 32266622 ECH