Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01528 ATGGGATTCAGATATCTTCGTCTCAAGCTCAAGGCATTCCGGCTGAAAAGGTTTCTGCTAGGACTTGGAGGCAGAAAGAAAAAGTACCTGCTGGCAAAGAAGCCTTCATGGATGATGCCAATAACACATGGTTATCAAGTGGTGGAGCATCATATGATCAGAGATGGTTCTGATTATTCAGACCTTGATTCAGTTGTGGTACAAAGAGAGCAAATTGATCACACAGAATTGTGGTATTTTGGAATCTTTGATGCATTAACTGGAGACAAGGTTACCAAATACATGCAATCCCATTTCTTTGCCAAGAAGCTTCAAGAGGCTAATATATGGAGAAAAAGCAAAGAAACGTTGAAGAGAGCTTATCATGGGGTAAGGGCAAAAATCAGAGAGGAACAAAAGTCAGAAGAGACATACAGAATGGGTTCAGCATCTGCTATGGTAATCAATGGAGAAAAACTTGTGATAGCCCACATGGGAGATTACAGAACTGTTGTGTGTAGAGATGGAATAGCTCATCAGACAACTGGCATATACCAACAATCATCCAAAAGACATTGGTCTCGCAGACTATTTGCAGGAAATGCAGCAGGTACAAAGCATTCTAGAGGCTCGGAACTTGTCATCAGATGTGAAAGGATTGATTCTAATACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTAATGAAGAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGCAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAGTTAGGATGAGTAAAAGCAACATCTCATGCTTAATCATTCGCTTTGACTAA 825 0.4073 MGFRYLRLKLKAFRLKRFLLGLGGRKKKYLLAKKPSWMMPITHGYQVVEHHMIRDGSDYSDLDSVVVQREQIDHTELWYFGIFDALTGDKVTKYMQSHFFAKKLQEANIWRKSKETLKRAYHGVRAKIREEQKSEETYRMGSASAMVINGEKLVIAHMGDYRTVVCRDGIAHQTTGIYQQSSKRHWSRRLFAGNAAGTKHSRGSELVIRCERIDSNTEFLILASNGIWEVMKNQEAVNLISHIEDPQAAAECLAKEALVRMSKSNISCLIIRFD* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01528 274 PANTHER PROTEIN PHOSPHATASE 61 272 IPR015655 GO:0004722|GO:0006470
Rops6g01528 274 CDD PP2Cc 63 273 IPR001932 -
Rops6g01528 274 SUPERFAMILY PP2C-like 65 274 IPR036457 -
Rops6g01528 274 SMART PP2C_4 49 271 IPR001932 -
Rops6g01528 274 ProSiteProfiles PPM-type phosphatase domain profile. 55 273 IPR001932 -
Rops6g01528 274 Gene3D - 48 274 IPR036457 -
Rops6g01528 274 Pfam Protein phosphatase 2C 212 266 IPR001932 -
Rops6g01528 274 Pfam Protein phosphatase 2C 79 175 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01528 Rops-Chr6 32009981 32012092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01528 1 273 PP2C-type Phosphatase Gene Family AT3G23360 50.000 5.56e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01528 K19704 - gmx:100785227 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01528 6 32009981 32012092 Rops6g01528 6 32009981 32012092 ECH