Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops6g01524 | ATGGCTCCCACACCTTCTTCCAAACCAAACCACCCCTCTCAGTTGAAGACCCCACAGTCCAAGCATCGCCTCAACTTCAATGGCCTCAAAACAGCACCACCACCACCACACCCATCTCCCAATCCCAATTCTGCTATCAACAAAGAGGCCCCTCCTGAACACCCTATTGAAGTCGTTGCCAGAATCCGTGACTACCCAGATCGAAAAGATAAGCCTTTATCGGTTCTTCAGACTAATTCCAACTCCAAATCTATCAGGGTTCGTGCAGATTTTGGATACAGGGACTTCACCCTTGATGGGGTTTCTGTGTCTGAGGAAGAGGACTTGGATGTGTTCTATAAGAAATTTGTGGAATCAAGGATCAATGGGGTTAAGCTGGGGGACAAGTGCACTATCATGATGTATGGGCCAACTGGTTCAGGCAAGAGTCACACCATGTTTGGGTGTTCAAAGCAGGCAGGGATTGTGTATAGGTCGTTGAGGGACATTCTTGGGGATGGGGATGCTGATGCTGATGGAGATGGTGATTCTAAAGGACAGCATCTTGGGTTGGGAACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTCTTGTCCACCAATGGAGGAGGAGGAGGAGGATTTGGATTTGGGTGGTCCAAGGGCAGTGCTTCAAAGACAAAACTTGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGGAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCCAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTAGGAGGGCGGCTAATGCTTGTAGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCATTGAAGAGAGTGGTCGAGTCCATTGCAAATGGAGATTCACATGTGCCTTTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTGTGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTGTACGCTTGAATATGGAGCGAAAGCAAAATGCATAGTTCGTGGCCCTCATACCCCCCCAGTCAAGGATGAGGAATCTTCTTCTGCTGTCATTTTGGGGTCAAGAATTGCTGCAATGGATGAATTTATCTTGAAGCTACAAATGGAAAACAAGCTAAGAGAGAAAGAGCGAAATGAAGCACATAAAAAGCTTTTGAAGAAAGAGGAAGAAATGGCTGAGTTAAGAGCTAAACTGGAGATTACAGAAGGCAAAGGAACTCCTGCAAGTGAGGAGGAGATTAACCAGAAGGTAAATGAACGAACCCGGTTTCTGAGACAAGAGTTGGAGAAAAAGTTGGAAGAGTGCCAAAGAATAACTAATGAATTTGTTGAATTGGAGAGGAAGAGAATGGAAGAAAGGATACTGCAGCAGCAGGAGGAAGTTGAAACTCTGAGAAAGAGACTGGAAGAAATTGAGTTGCAGCTATGTTGTTCAAGGAATAATGGGGGTACTGAGGACAATGAATCAAAAGACATTGAGTCAAGCGGGTTTGCAAGAAGGCTAATGCGTATTTACAAAAGTGAGGAGGATCTTGGAATGGTGAAATCAATGGATTTGGACATGGACGATCAAGAACCCCTTGCACGTGAAGTAAATATTGTTGGTGGAGTTATGTGCAGGAGTGGTTACAATGTTACGCAAGACTTTTCAACAAATCAACCTGGTCCAAATACTTTGAATGTTGTGCAAGAAGATGCTTATGTTTGTGCACCAAACTTTGGTCATAGAGCATGTCTTACTACAGTATATGAAGAAGAAGAAGAAGGAGAACAGGATCATGAAGATAAAGGGGAAGATGAGGAAGTGGAGAAAGAAGTCATAGAGGAAAAGAGGGTATGTACTATTGACCAACCCAGTGCTGCTGGATCCTTGACAACTTTGAACCCATTGCATAGCAAAATTCCAAAGAAAGAGGATTATTGTTTTAAGGAAAGTTCAGAGGATAACAAGGATACCGAGTCTTCTAGACTGTTAAGAATTCAAAATATTTTCACTCTTTGTGGAAATCAAAGAGAGCTCTCCCAGCACATTGGAACCCCAATAGCTGCTACAAAAAAGAAGTCTGATGAAACTTTTGATATCAAGTTTTCTCCTGTGAAGACAAGTGCAAAGGATTCCATTTTTCAAATCTCCAACAAGGAGAACTTTGAACCACATAATGTTGTTGGAAATTAG | 2346 | 0.4228 | MAPTPSSKPNHPSQLKTPQSKHRLNFNGLKTAPPPPHPSPNPNSAINKEAPPEHPIEVVARIRDYPDRKDKPLSVLQTNSNSKSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRSLRDILGDGDADADGDGDSKGQHLGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGFGFGWSKGSASKTKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTICTLEYGAKAKCIVRGPHTPPVKDEESSSAVILGSRIAAMDEFILKLQMENKLREKERNEAHKKLLKKEEEMAELRAKLEITEGKGTPASEEEINQKVNERTRFLRQELEKKLEECQRITNEFVELERKRMEERILQQQEEVETLRKRLEEIELQLCCSRNNGGTEDNESKDIESSGFARRLMRIYKSEEDLGMVKSMDLDMDDQEPLAREVNIVGGVMCRSGYNVTQDFSTNQPGPNTLNVVQEDAYVCAPNFGHRACLTTVYEEEEEGEQDHEDKGEDEEVEKEVIEEKRVCTIDQPSAAGSLTTLNPLHSKIPKKEDYCFKESSEDNKDTESSRLLRIQNIFTLCGNQRELSQHIGTPIAATKKKSDETFDIKFSPVKTSAKDSIFQISNKENFEPHNVVGN* | 782 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops6g01524 | 781 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Rops6g01524 | 781 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 56 | 396 | IPR027417 | - | |
Rops6g01524 | 781 | MobiDBLite | consensus disorder prediction | 7 | 26 | - | - | |
Rops6g01524 | 781 | PANTHER | KINESIN-RELATED | 58 | 659 | IPR027640 | GO:0003777|GO:0007018 | |
Rops6g01524 | 781 | Coils | Coil | 425 | 461 | - | - | |
Rops6g01524 | 781 | Gene3D | Kinesin motor domain | 39 | 392 | IPR036961 | - | |
Rops6g01524 | 781 | SMART | kinesin_4 | 53 | 397 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Rops6g01524 | 781 | FunFam | p-loop containing nucleoside triphosphate hydrolase superfamily protein | 37 | 394 | - | - | |
Rops6g01524 | 781 | PRINTS | Kinesin heavy chain signature | 288 | 306 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Rops6g01524 | 781 | PRINTS | Kinesin heavy chain signature | 127 | 148 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Rops6g01524 | 781 | PRINTS | Kinesin heavy chain signature | 265 | 282 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Rops6g01524 | 781 | PRINTS | Kinesin heavy chain signature | 338 | 359 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Rops6g01524 | 781 | Pfam | Kinesin motor domain | 77 | 389 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Rops6g01524 | 781 | Coils | Coil | 471 | 531 | - | - | |
Rops6g01524 | 781 | ProSiteProfiles | Kinesin motor domain profile. | 55 | 389 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops6g01524 | Rops-Chr6 | 31986866 | 31990384 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops6g01524 | 110 | 393 | Calmodulin-binding Proteins | AT5G65930 | 28.094 | 1.75e-24 | 108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops6g01524 | - | K10398 | gmx:100779567 | 1202.58 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops6g01524 | 6 | 31986866 | 31990384 | Rops6g01524 | 6 | 31986866 | 31990384 | ECH |