Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01524 ATGGCTCCCACACCTTCTTCCAAACCAAACCACCCCTCTCAGTTGAAGACCCCACAGTCCAAGCATCGCCTCAACTTCAATGGCCTCAAAACAGCACCACCACCACCACACCCATCTCCCAATCCCAATTCTGCTATCAACAAAGAGGCCCCTCCTGAACACCCTATTGAAGTCGTTGCCAGAATCCGTGACTACCCAGATCGAAAAGATAAGCCTTTATCGGTTCTTCAGACTAATTCCAACTCCAAATCTATCAGGGTTCGTGCAGATTTTGGATACAGGGACTTCACCCTTGATGGGGTTTCTGTGTCTGAGGAAGAGGACTTGGATGTGTTCTATAAGAAATTTGTGGAATCAAGGATCAATGGGGTTAAGCTGGGGGACAAGTGCACTATCATGATGTATGGGCCAACTGGTTCAGGCAAGAGTCACACCATGTTTGGGTGTTCAAAGCAGGCAGGGATTGTGTATAGGTCGTTGAGGGACATTCTTGGGGATGGGGATGCTGATGCTGATGGAGATGGTGATTCTAAAGGACAGCATCTTGGGTTGGGAACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTCTTGTCCACCAATGGAGGAGGAGGAGGAGGATTTGGATTTGGGTGGTCCAAGGGCAGTGCTTCAAAGACAAAACTTGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGGAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCCAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTAGGAGGGCGGCTAATGCTTGTAGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCATTGAAGAGAGTGGTCGAGTCCATTGCAAATGGAGATTCACATGTGCCTTTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTGTGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTGTACGCTTGAATATGGAGCGAAAGCAAAATGCATAGTTCGTGGCCCTCATACCCCCCCAGTCAAGGATGAGGAATCTTCTTCTGCTGTCATTTTGGGGTCAAGAATTGCTGCAATGGATGAATTTATCTTGAAGCTACAAATGGAAAACAAGCTAAGAGAGAAAGAGCGAAATGAAGCACATAAAAAGCTTTTGAAGAAAGAGGAAGAAATGGCTGAGTTAAGAGCTAAACTGGAGATTACAGAAGGCAAAGGAACTCCTGCAAGTGAGGAGGAGATTAACCAGAAGGTAAATGAACGAACCCGGTTTCTGAGACAAGAGTTGGAGAAAAAGTTGGAAGAGTGCCAAAGAATAACTAATGAATTTGTTGAATTGGAGAGGAAGAGAATGGAAGAAAGGATACTGCAGCAGCAGGAGGAAGTTGAAACTCTGAGAAAGAGACTGGAAGAAATTGAGTTGCAGCTATGTTGTTCAAGGAATAATGGGGGTACTGAGGACAATGAATCAAAAGACATTGAGTCAAGCGGGTTTGCAAGAAGGCTAATGCGTATTTACAAAAGTGAGGAGGATCTTGGAATGGTGAAATCAATGGATTTGGACATGGACGATCAAGAACCCCTTGCACGTGAAGTAAATATTGTTGGTGGAGTTATGTGCAGGAGTGGTTACAATGTTACGCAAGACTTTTCAACAAATCAACCTGGTCCAAATACTTTGAATGTTGTGCAAGAAGATGCTTATGTTTGTGCACCAAACTTTGGTCATAGAGCATGTCTTACTACAGTATATGAAGAAGAAGAAGAAGGAGAACAGGATCATGAAGATAAAGGGGAAGATGAGGAAGTGGAGAAAGAAGTCATAGAGGAAAAGAGGGTATGTACTATTGACCAACCCAGTGCTGCTGGATCCTTGACAACTTTGAACCCATTGCATAGCAAAATTCCAAAGAAAGAGGATTATTGTTTTAAGGAAAGTTCAGAGGATAACAAGGATACCGAGTCTTCTAGACTGTTAAGAATTCAAAATATTTTCACTCTTTGTGGAAATCAAAGAGAGCTCTCCCAGCACATTGGAACCCCAATAGCTGCTACAAAAAAGAAGTCTGATGAAACTTTTGATATCAAGTTTTCTCCTGTGAAGACAAGTGCAAAGGATTCCATTTTTCAAATCTCCAACAAGGAGAACTTTGAACCACATAATGTTGTTGGAAATTAG 2346 0.4228 MAPTPSSKPNHPSQLKTPQSKHRLNFNGLKTAPPPPHPSPNPNSAINKEAPPEHPIEVVARIRDYPDRKDKPLSVLQTNSNSKSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRSLRDILGDGDADADGDGDSKGQHLGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGFGFGWSKGSASKTKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTICTLEYGAKAKCIVRGPHTPPVKDEESSSAVILGSRIAAMDEFILKLQMENKLREKERNEAHKKLLKKEEEMAELRAKLEITEGKGTPASEEEINQKVNERTRFLRQELEKKLEECQRITNEFVELERKRMEERILQQQEEVETLRKRLEEIELQLCCSRNNGGTEDNESKDIESSGFARRLMRIYKSEEDLGMVKSMDLDMDDQEPLAREVNIVGGVMCRSGYNVTQDFSTNQPGPNTLNVVQEDAYVCAPNFGHRACLTTVYEEEEEGEQDHEDKGEDEEVEKEVIEEKRVCTIDQPSAAGSLTTLNPLHSKIPKKEDYCFKESSEDNKDTESSRLLRIQNIFTLCGNQRELSQHIGTPIAATKKKSDETFDIKFSPVKTSAKDSIFQISNKENFEPHNVVGN* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01524 781 MobiDBLite consensus disorder prediction 1 53 - -
Rops6g01524 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 396 IPR027417 -
Rops6g01524 781 MobiDBLite consensus disorder prediction 7 26 - -
Rops6g01524 781 PANTHER KINESIN-RELATED 58 659 IPR027640 GO:0003777|GO:0007018
Rops6g01524 781 Coils Coil 425 461 - -
Rops6g01524 781 Gene3D Kinesin motor domain 39 392 IPR036961 -
Rops6g01524 781 SMART kinesin_4 53 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01524 781 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 37 394 - -
Rops6g01524 781 PRINTS Kinesin heavy chain signature 288 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01524 781 PRINTS Kinesin heavy chain signature 127 148 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01524 781 PRINTS Kinesin heavy chain signature 265 282 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01524 781 PRINTS Kinesin heavy chain signature 338 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01524 781 Pfam Kinesin motor domain 77 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01524 781 Coils Coil 471 531 - -
Rops6g01524 781 ProSiteProfiles Kinesin motor domain profile. 55 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01524 Rops-Chr6 31986866 31990384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01524 110 393 Calmodulin-binding Proteins AT5G65930 28.094 1.75e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01524 - K10398 gmx:100779567 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01524 6 31986866 31990384 Rops6g01524 6 31986866 31990384 ECH