Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01461 ATGGCTGGACAACTAGGAGTGCTTAGTGCACTCGATGCGGCCAAGACACAATGGTACCACTTCACTGCAATTGTGATTGCTGGAATGGGTTTCTTCACTGATGCCTATGATCTCTTCTGCATTTCCCTTGTCACCAAGTTGCTGGGACGGATATATTACACAGATATAACCAAACCAAAGCCCGGTGTTCTTCCTCCTAATGTGCAAGCTGCTGTGACTGGTGTTGCACTATGTGGCACTTTAGCTGGCCAGCTTTTCTTTGGTTGGCTTGGTGACAAGTTGGGAAGAAAAAAGGTTTATGGCATGACCCTTATGGTCATGGTAGTGTGTTCCGTTGCCTCTGGGCTGTCTTTTGGATCTAGTCCAAAGGGTGTCATGGCCACCCTTTGTTTCTTCAGGTTTTGGCTTGGGTTTGGGATTGGTGGTGACTACCCTCTTTCAGCTACTATCATGTCTGAATATGCCAACAAGAAGACAAGAGGGGGATTTATTGCTGCTGTGTTTGCTATGCAAGGATTTGGAATCCTGGCTGGTGGAATGGTTGCCTTGATTGTGGCTACTTCATTTGACCACAAATACAGGGTTCCTACTTATGAAGAAAACCCTGAAGCATCATTGGTGCTACCTGCCTTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAGTCCCAGCTGCACTTACCTATTACTGGCGTATGAAAATGCCTGAGACAGCTCGTTACACAGCCCTTGTTGCCAGGAATGCCAAACAAGCTGCTTCAGACATGTCCAAGGTGTTACAAGTTGAACTTGAAGCTGAAGAGGAGAAGGTGCAGCAGTTGACTGAGAATCAAAACCAAAAGTATGGTTTGTTCAGCAAGGAATTTGCCAAACGCCACGGGCTGCACTTAGTGGGAACCACAACTACTTGGTTCTTATTGGACATTGCCTTCTATAGCCAGAACCTTTTCCAAAAGGACATTTTCAGTGCCATTGGATGGATCCCTCCTGCAAAAGAAATGAATGCAATCCATGAGGTTTATAGGATTGCAAGAGCACAAACACTTATAGCACTGTGCAGTACCGTGCCAGGGTACTGGTTTACAGTGTTCTTGATTGATTACATGGGCCGTTTCGCGATCCAATTGATGGGTTTCTTCTTCATGACCGTCTTCATGTTTGCTCTGGCTATACCCTATGATCACTGGACCAAGAAAGATAACAGAATTGGGTTTGTAGTGATTTACTCCCTCACCTTCTTCTTCTCCAACTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGATCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTAGGTGCATTTGGATTCTTATATGCTGCACAAAGTAAGGACCCCACCAAGACTGATACAGGTTACCCAACTGGTATTGGGGTTAAGAACTCTCTCATTGTGCTTGGTGTGGTCAACTTCTTGGGAATGGTGTTCACCATGTTAGTACCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTGGGGAGAATGAAGAAGATGGTGCTGAGGCTATAGAGACGGCAGGGTCCTTTAGGACCGTTCCAGTTTAA 1614 0.4554 MAGQLGVLSALDAAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDITKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGMTLMVMVVCSVASGLSFGSSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGGFIAAVFAMQGFGILAGGMVALIVATSFDHKYRVPTYEENPEASLVLPAFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVELEAEEEKVQQLTENQNQKYGLFSKEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYRIARAQTLIALCSTVPGYWFTVFLIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKDNRIGFVVIYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDTGYPTGIGVKNSLIVLGVVNFLGMVFTMLVPESKGKSLEELSGENEEDGAEAIETAGSFRTVPV* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01461 537 FunFam Inorganic phosphate transporter 1-6 19 528 - -
Rops6g01461 537 CDD MFS_PhT 24 507 - -
Rops6g01461 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 511 - -
Rops6g01461 537 Gene3D MFS general substrate transporter like domains 270 530 IPR036259 -
Rops6g01461 537 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Rops6g01461 537 MobiDBLite consensus disorder prediction 512 537 - -
Rops6g01461 537 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Rops6g01461 537 Coils Coil 251 278 - -
Rops6g01461 537 SUPERFAMILY MFS general substrate transporter 11 515 IPR036259 -
Rops6g01461 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Rops6g01461 537 Pfam Sugar (and other) transporter 24 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01461 Rops-Chr6 30586012 30589369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01461 1 521 Inorganic Solute Cotransporters AT3G54700 81.609 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01461 K08176 - gmx:100792177 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01461 6 30586012 30589369 Rops6g01461 6 30586012 30589369 ECH