Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01455 ATGGAGCTACTGCCTGCAATAATTGGCAGCAACTTCAATGTTGTAATATTCGAATGCCTGTTCATGAGCAAGGTTAACAAGCCTCCACTGTCTTTTTCAATGTTGATTAAGTATATGAAGGGGAAGGAAGATGATAAGATTGTTGTGGTGGTGGGAACTATAACCAATGATATACATGTTTACAACACCCATGTTTCCACAGACTGCATGAGCAAGAATGCAAAAGGCAGAGAACAGAACTACAAGATCAATATCAATATCAATAAGGCCTGTCCAAGCTATCTCCTCACAAGAATTATGAACTTTCCATGCACGCCTGTGATCAATTAA 330 0.3909 MELLPAIIGSNFNVVIFECLFMSKVNKPPLSFSMLIKYMKGKEDDKIVVVVGTITNDIHVYNTHVSTDCMSKNAKGREQNYKINININKACPSYLLTRIMNFPCTPVIN* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01455 109 PANTHER 60S RIBOSOMAL PROTEIN L18 9 62 IPR000039 GO:0003735|GO:0005840|GO:0006412
Rops6g01455 109 Pfam Ribosomal protein 60S L18 and 50S L18e 9 63 IPR021131 -
Rops6g01455 109 Gene3D - 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01455 Rops-Chr6 30385501 30386254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01455 10 62 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 58.491 1.15e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01455 K02883 - gmx:100527681 78.1814