Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01444 ATGGAACAGAAAAGATTTTCTCTTGTGCTTATATACAGAAAGTTCAAGCCACACCTGCTCATGGTCTTTGCCCAGGTGTGCTATACCTTCTTAAATTTCATTACTGAAGCCTCCTTCAATCATGGGATGAGTCCTTATGTGTATGTAACCTATCGGCATGTTGTGGCTGGGGTTGTGATGTTCCCTTTTGCATATTTCCTGGAGAGAAATATAAGACCAAAGCTGACATTTGCTCTTCTTATGGAAATTTTTGTGCTTTCACTGTTAGGGAACAGTTTGGCTCTTAATTTATACTTTGCGAGCCTGAAGTGCACTTCTCCGACCTTTATCGCTTCCATGTACAACATCATATCTTCCCTTACCTTCATTATTGCTGTGGCACTCAGGTTTGAGGTTATTAATCTTCGAAATCCTCGTGGTATCGCAAAAGTTCTTGGGACCTTGATCTCGTTAGCTGGTGTAATGACCATGACACTATACAAGGGACCCATTATGAGAAATTTGTGGCGTCCTCTAATCCATATTCAAAGAAGTGCTGCTATCAATGAGAGCTGGTTAAAGGGTTCACTTCTTACAGTTTCATGCTGCGTCACATTTTCTATATGGTTCATTATGCAGGCGGCCACTTTGAAAAGATACCCTGCACAATTGTCACTCACTACGTGGATGTGCTTTATTGGAGCAGCACAATCAGCTGTTTTCACAGCCATAGCAGAATATAACCACCCTTCAGCATGGACTATAGGGCTCAACATTGACCTATGGTCCACAATATATGGGGGAATCGTCATATCTGGTTTGTTTATCTACGTTCAGCTATGGTGCACCGAGAAAAAAGGGCCAGTTTTTGTCACAATGTTCAATCCTCTTGGTACGATATTAGTGGCAAGTGTAGCATACTTCGTCCTTGGTGAAAAACTTTATTTGGGCAGCATCATAGGTGCATTTATCATCATCATTGGTCTGTACTTGCTGTTGTGGGGCAAAGAAGGTGACATGATATAA 1005 0.4159 MEQKRFSLVLIYRKFKPHLLMVFAQVCYTFLNFITEASFNHGMSPYVYVTYRHVVAGVVMFPFAYFLERNIRPKLTFALLMEIFVLSLLGNSLALNLYFASLKCTSPTFIASMYNIISSLTFIIAVALRFEVINLRNPRGIAKVLGTLISLAGVMTMTLYKGPIMRNLWRPLIHIQRSAAINESWLKGSLLTVSCCVTFSIWFIMQAATLKRYPAQLSLTTWMCFIGAAQSAVFTAIAEYNHPSAWTIGLNIDLWSTIYGGIVISGLFIYVQLWCTEKKGPVFVTMFNPLGTILVASVAYFVLGEKLYLGSIIGAFIIIIGLYLLLWGKEGDMI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01444 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Rops6g01444 334 PANTHER WAT1-RELATED PROTEIN 17 331 IPR030184 GO:0016020|GO:0022857
Rops6g01444 334 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020
Rops6g01444 334 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Rops6g01444 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01444 Rops-Chr6 30190075 30195077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01444 16 332 Nodulin-like Gene Family AT5G07050 44.207 1.62e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01444 - - gmx:100527877 523.472