Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01443 ATGTACAGAGAGTTCAAGCCACACCTGCTCATGGTCTTTGTCCAGGTGTGCTATACCTTCTTAAATTTTATCACTGAAGCCTCCTTCAATCATGGGATGAGTCCTTATGTGTATGTAACCTATCGGCATGTTGTGGCTGGGGTTGTGATGTTCCCTTTTGCATACTTTCTGGAGAGAAATTTAAGACCAAAATTGACATTTGCTCTTTTTATGGAAATTTTTGTGCTTTCACTGTTAGGGATCAGTTTGACTCTTAATTTGTACTTTGCAAGCCTGAAGTGCACTTCTCCTACCTTTGTTGCTTCCATGGCCAACACCATATCTTCCCTTACCTTCATTATAGCGGTGGCACTCAGATACGAGATTGTTAATCTTCGAAATCTTCGTGGTATAGCAAAAGTTCTTGGGACCTTGATCTCCTTAGCTGGTGTAATGATCATGACACTTTACAAGGGACACATTATGAGAGATTTGTGGCATCCATTAATCCATATTCAAAGAAGAAGTGTTGCTATCAATGAGAGCTGGTTAAAGGGTTCACTTCTTACAGTTTCATTCTGCGTTACCTGGTCTATACGGTTCATTATGCAGGCAACCACTTTGAAAAGATACCCTGCACAATTGTCACTCACTACGTGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAGTGATAGCAGAACATAACCACCCTTCAGCATGGATTATAGGGATCAATATTGACTTTTGGTCCACACTATACGGGGGAATCATTGTATCTGGTTTGTTAATCTATTTTCAACTATGGTGCACCGTGGAAAAAGGGCCAGTTTTTGTCGCAATGTTCAACCCTCTTTGTACGATATTAGTGGCCATTCTAGCATATTTCGTCCTTGGTGAAAAACTTTATTTGGGCAGCATCATAGGTGCATTTATCATCATCATTGGTATGTACTTGTTGTTGTGGGGTAAAGAAGGTGACAGAGAGGTTGATATGAAGACCAAAGATAAATCACAGTGCAGTAATGAAGAGTCGGAATGTAGAATACAGTCGGCAACTTTAACTGGAAAGGAAGAAGTGCAGATCCAAGTGGGATGA 1086 0.4079 MYREFKPHLLMVFVQVCYTFLNFITEASFNHGMSPYVYVTYRHVVAGVVMFPFAYFLERNLRPKLTFALFMEIFVLSLLGISLTLNLYFASLKCTSPTFVASMANTISSLTFIIAVALRYEIVNLRNLRGIAKVLGTLISLAGVMIMTLYKGHIMRDLWHPLIHIQRRSVAINESWLKGSLLTVSFCVTWSIRFIMQATTLKRYPAQLSLTTWMCFVGAAQSAVFTVIAEHNHPSAWIIGINIDFWSTLYGGIIVSGLLIYFQLWCTVEKGPVFVAMFNPLCTILVAILAYFVLGEKLYLGSIIGAFIIIIGMYLLLWGKEGDREVDMKTKDKSQCSNEESECRIQSATLTGKEEVQIQVG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01443 361 PANTHER WAT1-RELATED PROTEIN 7 328 IPR030184 GO:0016020|GO:0022857
Rops6g01443 361 Pfam EamA-like transporter family 178 317 IPR000620 GO:0016020
Rops6g01443 361 Pfam EamA-like transporter family 22 148 IPR000620 GO:0016020
Rops6g01443 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 320 - -
Rops6g01443 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01443 Rops-Chr6 30163813 30167524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01443 6 344 Nodulin-like Gene Family AT5G07050 41.477 6.12e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01443 - - gmx:100527877 552.362