Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01441 ATGGTCTTTGTGCAGGTGTGCTATACCCTCTTAAATTTTATCACTGAAGCCTCCCTCAATCATGGGATGAGTCCTTATGTGTATGTAACCTATCGACATGTTGTGGCTGGGGTTGTGATGTTCCCTTTTGCATACTTTATGGAGAGAAATTTAAGACCCAAGCTGACATTTGCTCTTTTCACGGAAATTTTTGTGCTTTCACTGTTAGGGATCAGTTTGGCTCTTAATTTGTACTTTGCAAGCCTGAAGTGCACTTCTCCGACGTTTATTGCTTCCATGTTCAACACTGTATCTTCCCTTACCTTCATTATTGCGGTGGTACTCAGGTTTGAGGTTATTGATCTTCGAAATCCTCGTGGTATCGCAAAAGTTCTTGGGACCTTGATCTCATTAGCTGGTGTAATGACCATGACACTATACAAGGGACCCATTATGAGAAATTTGTGGCGTCCTCTAATCCATATTCAAAGAAGAAGTGCTGCTATCAATGAGAGCTGGTTAAAGGGTTCACTTCTTATGGTTTCATGCTGCGTCACATTTTCTATATGGTTCATTATGCAGGCAACCACTTTGAAAAGATATCCTGCACAACTGTCACTCACCACGTGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAATGATAACAGAACATAACCACCCTTCAGCATGGACTATAGGGATCAATATTGATTTGTGGTCCACAATATATGGGGGAATTGTTATTGCTGGTTTGTTAACCTACATTCAACTATGGTACAATGAAAAAAAGGGGCCAGTTTTTGTCACAATGTTCAACCCTCTTTGTACAATATTAGTGGCAATTCTAGCATACTTCGTCCTCGGCGAAAAACTTTATTTGGGCAGCATCATAGGTGCATTTATTATCATCATTGGTCTGTACTTGCTGTTGTGGGGCAAAGAAGGTGACAGAGAGGTTGATATCAAGACCAAAGGTAAATCGCAGTGCAGTAGTGAAGACTCAGAATGCAGAAAACTGTCGACAACTTCAACTGGAAAGAAAGAAGTGCACATCCAAGTGGGAACAGAATAA 1062 0.4105 MVFVQVCYTLLNFITEASLNHGMSPYVYVTYRHVVAGVVMFPFAYFMERNLRPKLTFALFTEIFVLSLLGISLALNLYFASLKCTSPTFIASMFNTVSSLTFIIAVVLRFEVIDLRNPRGIAKVLGTLISLAGVMTMTLYKGPIMRNLWRPLIHIQRRSAAINESWLKGSLLMVSCCVTFSIWFIMQATTLKRYPAQLSLTTWMCFVGAAQSAVFTMITEHNHPSAWTIGINIDLWSTIYGGIVIAGLLTYIQLWYNEKKGPVFVTMFNPLCTILVAILAYFVLGEKLYLGSIIGAFIIIIGLYLLLWGKEGDREVDIKTKGKSQCSSEDSECRKLSTTSTGKKEVHIQVGTE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01441 353 Pfam EamA-like transporter family 18 137 IPR000620 GO:0016020
Rops6g01441 353 Pfam EamA-like transporter family 168 307 IPR000620 GO:0016020
Rops6g01441 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 203 310 - -
Rops6g01441 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Rops6g01441 353 PANTHER WAT1-RELATED PROTEIN 1 314 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01441 Rops-Chr6 30139184 30147747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01441 1 332 Nodulin-like Gene Family AT5G07050 43.567 7.52e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01441 - - gmx:100527877 529.635