Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01397 ATGGTGGGCACGTACTTCTTGATATTTGCAGGCTGTGCTGCAGTGGTAGTGAACCTTAACAATGACAAAGTGGTGACACTTCCTGGAATTGCAGTTGTTTGGGGACTCACAGTTCTGGTATTGGTTTATTCTCTTGGTCACATCTCTGGTGCTCATTTCAACCCTGCTGTTACCATTGCTCATGCTTCCACCAAAAGGTTTCCTTTGAAGCTGGTGAATCAATTATACCCTTTTTCCTCTCTCACTCTTGATCTAAATTTGTTTTAG 267 0.427 MVGTYFLIFAGCAAVVVNLNNDKVVTLPGIAVVWGLTVLVLVYSLGHISGAHFNPAVTIAHASTKRFPLKLVNQLYPFSSLTLDLNLF* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01397 88 Gene3D Glycerol uptake facilitator protein. 1 76 IPR023271 -
Rops6g01397 88 ProSitePatterns MIP family signature. 52 60 IPR022357 -
Rops6g01397 88 PANTHER AQUAPORIN NIP2-1 1 73 IPR034294 -
Rops6g01397 88 SUPERFAMILY Aquaporin-like 2 72 IPR023271 -
Rops6g01397 88 Pfam Major intrinsic protein 2 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01397 Rops-Chr6 29584709 29584975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01397 1 72 Major Intrinsic Protein MIP AT4G18910 81.944 4.08e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01397 K09874 - gmx:100786924 129.798