Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01343 ATGCCAAGCACAAGAAATATGAGGCAACTGAACCTCAATCTGTGTTTCTCAAATACCACTCCTGAATCAGAATCTCCTCTAAGGAGCCCCTCACAACATCATATTCATAACAACCCTCCAAGTCCATCTCCCTCAATTATGGTAAAAAACTTCAACTCTCTCTATGACCCTACCTTAACCTTTGACAACTCTTACTACTCCTCTTCCTTCTCTACCACCACCACCTCTACCTCATTCGAATCCGAACCCGAACTTGCAGACTTGGCTGCAGCCTTTGCCTCCAAACGATTCTTCTTCTCCTCACCTGGCCCCTCCAACTCCCTGATTACTAAATGCACCAAACACTCCTTATCCTCATCGTTGATGGCCACCAAAGATGATGAACCTGATGATAAGGGTGAGAAAAAGAACAAGAAGAAGAAGGAGGAGGTGTTGTTCAATGGAAGCGTGGCAGTGCCAACTTACTCACCGGACCCTTACCTTGACTTCAGAAGGTCGATGCAGGAGATGGTGGAGGCACGTCCCGAGTTGATGGATGTGAAGTCCAATTGGAACATCTTGCACGAGCTTCTCCTATGTTACCTTGCACTCAACCCAAAGAGCACACACAAGTTCATTCTCGGTGCTTTTTCTGATCTCCTTGTTAGCCTCATGTCATTCAAGACAGATGATGGTGCTGGATGTTAA 687 0.4614 MPSTRNMRQLNLNLCFSNTTPESESPLRSPSQHHIHNNPPSPSPSIMVKNFNSLYDPTLTFDNSYYSSSFSTTTTSTSFESEPELADLAAAFASKRFFFSSPGPSNSLITKCTKHSLSSSLMATKDDEPDDKGEKKNKKKKEEVLFNGSVAVPTYSPDPYLDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSTHKFILGAFSDLLVSLMSFKTDDGAGC* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01343 228 ProSiteProfiles OVATE domain profile. 152 216 IPR006458 -
Rops6g01343 228 NCBIfam uncharacterized plant-specific domain TIGR01568 150 218 IPR006458 -
Rops6g01343 228 MobiDBLite consensus disorder prediction 120 140 - -
Rops6g01343 228 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 44 217 IPR038933 GO:0045892
Rops6g01343 228 MobiDBLite consensus disorder prediction 124 140 - -
Rops6g01343 228 Pfam Transcriptional repressor, ovate 156 217 IPR006458 -
Rops6g01343 228 MobiDBLite consensus disorder prediction 18 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01343 Rops-Chr6 28920471 28921245 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops6g01343 Ovate 7.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01343 - - aprc:113871147 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01343 6 28920471 28921245 Rops6g01343 6 28920471 28921245 ECH
Rops8g03019 8 67256732 67257509 Rops6g01343 6 28920471 28921245 PCT