Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01329 ATGGGTAACGGAGACTATGCATATCCTTCGAGCATGAACGTTGAAGAGAGTGTGCACAGTGTGGAAGTTCCACCGCCTCAGCCATTTTGGAAGTCTCTAAAGTACTCTATGAAGGAGACGTTTTTTCCAGATGACCCTTTGAGGCGGTTTAAGAACCAACCAGCCTCCAAGAGGTTCGTGCTTGGTCTTCAGTACTTCTTCCCCATCTTCGAATGGGCACCTCGCTACACCTTTCAGTTCTTGAAATCTGACATCATAGCTGGCATCACCATCGCTAGCTTGGCTATTCCTCAGGGTATCAGTTATGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCGTTGATTTATGCCATGATGGGTAGCTCAAGGGATTTGGCAGCGGGGACAGTGGCGGTTGGATCTCTTCTTATGGGTTCCATGTTGGCCAATGAGGTTAATCCCAACCAAAACCCAAAGCTTTTCCTCCACCTTGCTTTTACCGCTACATTCTTTGCTGGAGTTCTGCAAGCTGCATTGGGTCTGTTCAGGTTAGGTTTTATCGTGGATTTCTTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGTCTGCAACAGCTAAAATCGATTCTAGGCCTTGAGCATTTCACTCATGCTGCCGATATCATATCAGTGATGCGCTCTGTTTTTACCCAAACTCACGAGTGGAGGTGGGAAAGCGCTGTGTTGGGATGTTGCTTCATTTTCTTCCTCCTTATCACAAGATACTTCAGCAAAAAACGACCAAAGTTTTTTTGGGTGTCAGCAATGGCACCGTTGACGTCCGTTATATTGGGAAGTCTGCTGGTTTATTTCACTCACGCCGAGAAGCACGGCGTTCAAGTGATTGGAAATTTGAAGAAAGGGCTAAATCCACCATCAGTCACAGATCTGGTATTTGTGTCGCCTTATATGAGCACGGCTATTAAAACAGGCCTTGTTGTTGGCATTATAGCACTTGCTGAAGGAATAGCAGTGGGAAGAAGCTTTGCTATGTTTAAAAATTACCATATCGATGGCAACAAAGAGATGATAGCTTTTGGGACCATGAACATGGTTGGCTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTCTCTCGTTCAGCCGTGAACTATAATGCTGGATGCAAGACTGCAGCATCCAACATTGTAATGTCAATTGCAGTCATGTTGACATTGTTATTCCTAACACCCTTGTTCCATTACACTCCTCTGGTGGTGCTAGCAGCCATAATTGTATCTGCAATGCTTGGCCTCATAGATTATCAAGCAGCCATCCATCTGTGGAAGATTGACAAATTTGATTTTGTCGTGTGCATGAGTGCATATTTTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTTATAGCTGTTGCAATATCCGTACTTCGGATACTACTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGCAACGTTCCAAATTCTGGGATATACAGAAATGTGGAGCAATATCCAAATGCAAAAAATGTTCCTGGAATCCTAATTCTAGAGATTGATGCACCACTTTACTTTGCCAATGCAAACTATTTAAGAGAAAGGATTACAAGGTGGATTGATGAAGAGGAAGAAAGAATTAAAGCGACAGGGGAGCCAAGTTTGCAGTATGTTATAATGGATATGAGTGCTGTTGGAAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAGATTGCAGACAGAAGAGGGCTGCAACTTGTTTTGGTTAATCCTGGAAGCGAGGTGATGAAGAAACTAAACAAATCCAACTTCCAAAAGGATACGGGGCAAAAATGGATCTATCTGACAGTTGAAGAGGCTGTCAGAGCATGCCACTTTATGCTCCATGCATGCAAAATAGATCCTAAAAGAGATGAATCAGAGGGTTGGAACAATGTCTAA 1974 0.4387 MGNGDYAYPSSMNVEESVHSVEVPPPQPFWKSLKYSMKETFFPDDPLRRFKNQPASKRFVLGLQYFFPIFEWAPRYTFQFLKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAAGTVAVGSLLMGSMLANEVNPNQNPKLFLHLAFTATFFAGVLQAALGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHAADIISVMRSVFTQTHEWRWESAVLGCCFIFFLLITRYFSKKRPKFFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGNLKKGLNPPSVTDLVFVSPYMSTAIKTGLVVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGTMNMVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLAAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCMSAYFGVVFGSVEIGLVIAVAISVLRILLFVARPRTFVLGNVPNSGIYRNVEQYPNAKNVPGILILEIDAPLYFANANYLRERITRWIDEEEERIKATGEPSLQYVIMDMSAVGNIDTSGISMLEEVKKIADRRGLQLVLVNPGSEVMKKLNKSNFQKDTGQKWIYLTVEEAVRACHFMLHACKIDPKRDESEGWNNV* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01329 657 SUPERFAMILY SpoIIaa-like 516 635 IPR036513 -
Rops6g01329 657 Gene3D STAS domain 492 637 IPR036513 -
Rops6g01329 657 Pfam STAS domain 513 631 IPR002645 -
Rops6g01329 657 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Rops6g01329 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Rops6g01329 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Rops6g01329 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Rops6g01329 657 PANTHER SULFATE TRANSPORTER 31 643 IPR001902 GO:0016020|GO:0055085
Rops6g01329 657 FunFam Sulfate transporter 31 492 638 - -
Rops6g01329 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01329 Rops-Chr6 28714457 28721557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01329 19 657 Inorganic Solute Cotransporters AT4G02700 68.125 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01329 K17471 - gmx:100787694 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01329 6 28714457 28721557 Rops6g01329 6 28714457 28721557 ECH