Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01324 ATGAGGACTTTCTTCACTTCAGAGTCATGTAAAGAAGCGCACCCAAATGCTGTAAATCCACAGTCCTGGCTCCAAGTTGAAAGAGGGAAGCTTCCCAAATGGTCATCACAGTCCTCCTCCACATCACTAGAATCACTAGTCAAGGTCCCACAGCCACCTATACTCCCATTCTTTAAACCTGTTGATTATGTGGAAGTTTTAGCTCAAATCCATGAAGAACTCGAGTCGTGTTCTCCACAGGAGCAGTCAAATCTGTTTTTGTTGCAATATCAGGTCTTTAGGGGCCTTGGGGACGTTAAACTGATGCGAAGAAGCCTCCGGGAAGCTTGGCAGAGAGCCAACACTGTTCACGAGAAGATTATATTTGGGGCATGGTTGAAGTATGAGAAGCAAGGGGAAGAGCTAGTTGCTGGCTTGCCCATAGGTAAATGTGAGAAGGAATATGGGACCCTAGATGTAGAATCTTATATTACTTTTGATATAAATTTAAGTTCCCAGGAGAAAGTTTTGATGAATGGGGACCACACTTCACAAAATGTTATTTTTACAATTGGAAATGAGACGATAATCTGTGATAGAGAAAAGATTTCTGAACTTTCAGCACCGTTTCATGCAATGCTGAATGGGAATTTCAGGGAATCATTTTCTGAGACCATAGATTTGTCTGAAAACAATATCTCTCCTTCAGGTATGAGGGCAATAAGTTATTTCAGTTTGACAGGCAATTTACATGAGGTCCCTACAAATCTTTTGTTGGAGATATTAGTTTTTGCCAACAAATATTGTTGTGATAAACTAAAAGAGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAAAGAAGATGCTGTGGAACTCATGGGATATGCTCTTGACGAGAAATCAGCTGTCCTTGCAGCTTCTTGTTTACAATTCCTTTTGCGCGATCTTCCCAACTGCTTGAGTGACAATCAAGTGGTGGAGTTATTTGTTCATGCCAATAGGCAGCAGTTAGCAGTCATGGTTGGGCCTGGTTTATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTGCGACACAACAGCTCATTTCCTGGAACGGTTAGTTGATTTTGCTGAAAATGACAAGCAAAGACTTCTGGCTTTTCATCAATTGGGATGTGTAAGACTCTTGAGGAAAGAATATGATGAAGCTCGTTGCCTTTTTGAGGGAGCTGCAAACGCAGGTCATATTTACTCTGTTGCAGGTTTGGCTAGACTGGACTATATAAAGGGTGAGAAGCTTTTATCTTATGAGAAGATCAGCTCGGTCATTTCCTCTGTCAGGCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGATGGTGATTTGAGGTGGAAAGACCTTGAGAAAGCAACTGAACTGGACCCGACTCTTGTATATCCCTACATGTATAGGGCTTCCTCTTTAATGAGGATGCAGAATTCTCAAGGTGCACTGGCTGAAATCAATCGAATTCTTGGCTTCAAACTTTCATTAGAATGCTTGGAACTACGGTTTTTTATCTCTCTGGCTCTTGAGGACTATAAAGCAGCCCTCCGCGATGTTCAAGCAATTCTTACTCTATGTCCATATTATAGAATGTTTGAGGGGCGTGTAGCTGCATCTCAACTCCGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAAAAGCAGATTGTTGGGCACAATTATATGACTGCTGGTCTGCTGTTGATGATATTGAGTCTCTATCTGTTATTTACCAGATGCTCGAATCTGATGCAGATAAAGGTGTTCTATACTTCAGACAGTCATTGCTTCTCCTCAGGCTCAACTGTCCTGAGGCAGCTATGCGGAGTTTACAGTTAGCTTGGCAACATGCATCAAGTGAGCATGAACGACTTGTATACAAGGGGTGGATCTTGTATGATACAGGTCATTATGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTCTTTGTATGAAAAGGTCTTTCGAGGCCTACTTCCTGAAAGCCTATGCATTGGCCGACTCTAGTCTGGATTCATCATGTTCTTCAACTGTTATTTCACTTCTGGAAGATGCCTTGAGGTGTCCTTCTGATAATCTGCGGAAAGGTCAGGCCCTGAACAATCTTGGAAGTGTTTTTGTTGACTGTGGGAAATTGGACTCAGCAGCTGATTGCTATATCAAAGCCCTTAAAATCCGGCACACTCGAGCCCATCAGGGTCTTGCCCGTGTTCATTTTCTCAAAAATGATAAGGCCGCTGCTTACAAGGAAATGACCAATCTTATTCTGAAGGCTAAAAACAATGCATCAGCATATGAGAAGAGGTCTGAGTACGGTGATCGTGAACAAACAAAGGCAGATCTGGAGATGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTATAGATACCGAGCAGCAGTTTTGATGGACAACCATAAGGAAGAGGAAGCTATTGCTGAACTGTCTAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTACAATTACGTGCAGCATTCCATGAGCACAAGGGGGATGTCTTAGGTGCACTAAGAGACTGTCGTGCTGCACTCTCAGTGGACCCAAACCACCAAGAAATGTTGGAACTTCACACTCGTGTTAATAGCCACGAGCCATGA 2658 0.4259 MRTFFTSESCKEAHPNAVNPQSWLQVERGKLPKWSSQSSSTSLESLVKVPQPPILPFFKPVDYVEVLAQIHEELESCSPQEQSNLFLLQYQVFRGLGDVKLMRRSLREAWQRANTVHEKIIFGAWLKYEKQGEELVAGLPIGKCEKEYGTLDVESYITFDINLSSQEKVLMNGDHTSQNVIFTIGNETIICDREKISELSAPFHAMLNGNFRESFSETIDLSENNISPSGMRAISYFSLTGNLHEVPTNLLLEILVFANKYCCDKLKEACDRRLASLVSSKEDAVELMGYALDEKSAVLAASCLQFLLRDLPNCLSDNQVVELFVHANRQQLAVMVGPGLFALFCFLSEVSMNLNSSCDTTAHFLERLVDFAENDKQRLLAFHQLGCVRLLRKEYDEARCLFEGAANAGHIYSVAGLARLDYIKGEKLLSYEKISSVISSVRPLGWMYQERSLYCDGDLRWKDLEKATELDPTLVYPYMYRASSLMRMQNSQGALAEINRILGFKLSLECLELRFFISLALEDYKAALRDVQAILTLCPYYRMFEGRVAASQLRTLVREHVEHWTKADCWAQLYDCWSAVDDIESLSVIYQMLESDADKGVLYFRQSLLLLRLNCPEAAMRSLQLAWQHASSEHERLVYKGWILYDTGHYEEGLQKAEESLCMKRSFEAYFLKAYALADSSLDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVFVDCGKLDSAADCYIKALKIRHTRAHQGLARVHFLKNDKAAAYKEMTNLILKAKNNASAYEKRSEYGDREQTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLQLRAAFHEHKGDVLGALRDCRAALSVDPNHQEMLELHTRVNSHEP* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01324 885 SMART BTB_4 178 278 IPR000210 GO:0005515
Rops6g01324 885 SUPERFAMILY POZ domain 177 274 IPR011333 -
Rops6g01324 885 SUPERFAMILY TPR-like 461 776 IPR011990 GO:0005515
Rops6g01324 885 Gene3D Potassium Channel Kv1.1; Chain A 167 318 IPR011333 -
Rops6g01324 885 SMART tpr_5 508 541 IPR019734 GO:0005515
Rops6g01324 885 SMART tpr_5 708 741 IPR019734 GO:0005515
Rops6g01324 885 SMART tpr_5 837 870 IPR019734 GO:0005515
Rops6g01324 885 PANTHER ETO1-RELATED 1 884 IPR044631 GO:0010105
Rops6g01324 885 Gene3D Tetratricopeptide repeat domain 359 545 IPR011990 GO:0005515
Rops6g01324 885 SUPERFAMILY TPR-like 692 876 IPR011990 GO:0005515
Rops6g01324 885 Gene3D Tetratricopeptide repeat domain 584 768 IPR011990 GO:0005515
Rops6g01324 885 ProSiteProfiles TPR repeat profile. 708 741 IPR019734 GO:0005515
Rops6g01324 885 Gene3D Tetratricopeptide repeat domain 769 884 IPR011990 GO:0005515
Rops6g01324 885 Coils Coil 760 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01324 Rops-Chr6 28649339 28654120 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01324 - - gmx:100785039 1510.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03037 8 67471665 67479805 Rops6g01324 6 28649339 28654120 PCT