Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01322 ATGATGAACATTGAAAGGCAATGGGCAACTGAGACTGAACCCCTTATTGGAAGGCCATGCTTCAAACCATACATAGAAAGTCAACGCCAGCAATTGATAATGGTAGCCATCATTAGAACACGAATGTTCCGATCTTACAGCCCCAACGGATTTAGAAAAATTGATCCAGATAGATGGGAGTTTGCAAATGAAGGATTCCTCAGAGGGCAGAGGCACCTGTTGAGGAACATAAGGAGAAGGAAGGCACCTTCCCAACAACAAGCACATGGTCACTGTGTTGAAGTTGGCTGTTTTGGAATGGATGAAGAAATTGATCGTTTGAGGCACGAAAGACGGGTGTTGATGATGGAACTTGTGAATCTGAGACAGCAGCAACAGAATACCAGAGAGTACCTTCATGAGATGGAGCACAGGTTACAAAGGACAGAAATCAAGCAGCAACAAATGATGTCATTCTTAGCTAGAGCTATGAAAAACCCTGCCTTTATCCATCAACTACTCCAACAGAAAGAGAATAGAAAGGAGCTTGAAGAAGCCATGACCAAAAAGAGAAGGCAAATTGAACAAGGAACTAGATGTATTGGAGAATCAAGTAGTGTAGGTGAAGGAAGGAGCAGTGTTAAAGTTGAGCCTTTAGAATTAGGTGATTATGAATTTGGAGTGTCAGAGTTGGAAATGCTAGCTATGGAAATGCAGGGTTTTAGATGGGGAATGATAAACCAGGAGGAAGGACTAGAATCACAGGAGAGAATGGACAGGGAACCTGATGAAGGGTTCTGGGAAGAACTACTGTTTAGTGAGAAATTTGAGGGTCGATTTGACATTCCAACTGCTGAAGATAAAGACGAAGATGAAGATGTCAATGTGTTGGCCAATTGCTTTGGTTGCTTGGATTCAAGTCATTAA 906 0.4216 MMNIERQWATETEPLIGRPCFKPYIESQRQQLIMVAIIRTRMFRSYSPNGFRKIDPDRWEFANEGFLRGQRHLLRNIRRRKAPSQQQAHGHCVEVGCFGMDEEIDRLRHERRVLMMELVNLRQQQQNTREYLHEMEHRLQRTEIKQQQMMSFLARAMKNPAFIHQLLQQKENRKELEEAMTKKRRQIEQGTRCIGESSSVGEGRSSVKVEPLELGDYEFGVSELEMLAMEMQGFRWGMINQEEGLESQERMDREPDEGFWEELLFSEKFEGRFDIPTAEDKDEDEDVNVLANCFGCLDSSH* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01322 301 Coils Coil 104 124 - -
Rops6g01322 301 Gene3D - 25 81 IPR036388 -
Rops6g01322 301 Coils Coil 166 186 - -
Rops6g01322 301 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 50 191 IPR027725 -
Rops6g01322 301 SUPERFAMILY "Winged helix" DNA-binding domain 47 80 IPR036390 -
Rops6g01322 301 SMART hsfneu3 28 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01322 Rops-Chr6 28609319 28613623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01322 40 300 HSF AT3G22830 43.854 3.39e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01322 K09419 - gmx:100794264 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03039 8 67497854 67499390 Rops6g01322 6 28609319 28613623 PCT