Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01305 ATGACGACGGGTCTAGTAGGGGAACAGAACCTGGAAAAACACATTCAGAAGCAGATGGGGTGCATGGCTGGGTTCCTTCAGATCTTTGATCGCCACCAGTTACTCTCCGCTAAACGCATCTACTCCCCCAAAAGACTCCCTCCGGCTTCGTCGGATTCCTCGCCGGAACCGGAGAAACAGGGTGGCTCACCGGTGCGGTCAGCACCTTCTCCTGCGAGAGAGGTTCAATCTGAAGCCAAGGTGTCGCTTCCTGTTCTGGAGTTCAAGGAAGGAACGAGGTCTTCATGGAAGTTCTCCAGAGAGGCTCCCAGATTGTCTCTGGATAGCAGAGCAGTGGTGGATGCTAAAGGAGCCCTTCACCCTAGAGAGATCCGAACCAATACGACAACGAATCTTGGTGCTGAAAACGACGGAGACAAACAGCGTCGTTCCACTAGCGTGATTGCCAGGCTCATGGGGCTTGAGTCATTACCCGATTCGGATCCTGAACCCGTTGCTAAGCTTCGAAGATCCGCTTCAGAGTCCAGAGTCTCCAGAGATCTGCCACAGTGGTCCAAGTCCAGTAATTTCCAGTTGCAACCAAACACTCATCATAGCAATGTGGCCCAGCAGAATAATGCTAATGCTATGGAGAATAATCGATTATTCAATGGCAGAGCTGCAGAGGAAACCAGAGTTTCACTTCCCCTGAGGCAGAAGGGAACAATGGCACAAAAGAAGAGTTTTTATGACTCTGCTGACTTCTTCCCAGAACCAAAACACACCGTTTCAATCCATGAAGTGATTGAAAAGAGGTTGAGGATGAGAGGGATTGACCAACCTTCTCAGGATCTTCACACTCTCAAGCATATCTTGGAGGCTCTTCAGCTCAAGGGTCTCCTTCATTCCCCAAAACCAAACCAATCTCCCATTGTCGTCATGAAACCATTCAGATCTTCTGGTTCATTCAACCGAACCGGGAATGATTCTCCACCCTCAACCCTCCGGTCCAGTCCTCGAGCTCGCCGGAGCCCACGCCCCACCTGTGACACTGATCGGAATATAAGGACTCAACCCAGAAGCAGAAACTCGAGCCCAAACCGGAGAAAGGTCACAAACGTTGAGACGCAGAGGAAAGTGAGTAATGAGGGTGTTGATTCGAGAAGGGTGTCTCCGGTTAATTCGCCAAGGATAAACTCAAGAAGAAATGCAACGGGTCAGGTGGTGACAAGTGGATCGCCCAGGATGAGAAAAGTAATTGATCCTAAGGTGAAGGTGGTGTTGGGGGTGGCAGAGGATGAATTGTCCACCGTTTCAGATAATAGCTACAGCACCTCTTCACATACAGACACCGAGAGGTACAAGTTGGAAGAGTACAAGGAAGGGAGGAATCTGTTAGATAGGTGTGATAAGCTGCTCAACAGCATAGCGGAAATAACAGCAGTGAACGAGTTACAACCGAGTCCAGTATCGGTGCTTGACTCGTCATTTTACAAGGAGTGTTCACCTTCTCCAATAACCAAACGGTGCATTGATTACCATTACAAAGATCAAGCGGCGGAATCAGAAGATGATGTGTGGAGTGCAGCTTTGTGTAGCAGCGAAGGAAAATCCGAGGAGACAGCAGCAGAGGATTGTGATTTCGTTTACGTATCGGAGATCCTACGTGCTTGCAGTTACTTGCCGGAAGAGAGCGACATTTTCTTGTTACTGGAGAAACAGCAATGTCTGAAGGGGAAGGACACCTCAAAGGCTTCGAGGCTGCAGAGGAGGTTGATTTTCGACACGCTCCAGGAAATCCTGAACCGGAATCAACAGTTGCCACCGTGGAAGGCGGTGTCGAAGGGTGAGGAGACACAGAAGGTCTGGTCGGAGTTTCGGAGGATCCGAGAGAGGGAGGAATCTGAATCTGAGGACTTGTTCGGAGTAATATGTGGAGTGTTGAAGAAAGACATGGCGGAGGAGATGAGTGGTTGGGGTGAATGGCCAGTGGAGATGGGAGATGTCGTTTTGGACATCGAACGACTCGTCTTCAAAGATCTCATTGGTGACACCATACGACAACTAGCATCGTTTGCCACTCAATGTAACAAGCTATCGCCGCTTCGTAGGAAGCTTGTCTTTTGA 2106 0.4957 MTTGLVGEQNLEKHIQKQMGCMAGFLQIFDRHQLLSAKRIYSPKRLPPASSDSSPEPEKQGGSPVRSAPSPAREVQSEAKVSLPVLEFKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNTTTNLGAENDGDKQRRSTSVIARLMGLESLPDSDPEPVAKLRRSASESRVSRDLPQWSKSSNFQLQPNTHHSNVAQQNNANAMENNRLFNGRAAEETRVSLPLRQKGTMAQKKSFYDSADFFPEPKHTVSIHEVIEKRLRMRGIDQPSQDLHTLKHILEALQLKGLLHSPKPNQSPIVVMKPFRSSGSFNRTGNDSPPSTLRSSPRARRSPRPTCDTDRNIRTQPRSRNSSPNRRKVTNVETQRKVSNEGVDSRRVSPVNSPRINSRRNATGQVVTSGSPRMRKVIDPKVKVVLGVAEDELSTVSDNSYSTSSHTDTERYKLEEYKEGRNLLDRCDKLLNSIAEITAVNELQPSPVSVLDSSFYKECSPSPITKRCIDYHYKDQAAESEDDVWSAALCSSEGKSEETAAEDCDFVYVSEILRACSYLPEESDIFLLLEKQQCLKGKDTSKASRLQRRLIFDTLQEILNRNQQLPPWKAVSKGEETQKVWSEFRRIREREESESEDLFGVICGVLKKDMAEEMSGWGEWPVEMGDVVLDIERLVFKDLIGDTIRQLASFATQCNKLSPLRRKLVF* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01305 701 PANTHER LONGIFOLIA PROTEIN 1 60 IPR033334 GO:0051513
Rops6g01305 701 MobiDBLite consensus disorder prediction 177 194 - -
Rops6g01305 701 MobiDBLite consensus disorder prediction 294 406 - -
Rops6g01305 701 MobiDBLite consensus disorder prediction 162 176 - -
Rops6g01305 701 MobiDBLite consensus disorder prediction 306 334 - -
Rops6g01305 701 MobiDBLite consensus disorder prediction 43 79 - -
Rops6g01305 701 Pfam DUF761-associated sequence motif 143 160 IPR032795 -
Rops6g01305 701 MobiDBLite consensus disorder prediction 336 350 - -
Rops6g01305 701 MobiDBLite consensus disorder prediction 380 405 - -
Rops6g01305 701 MobiDBLite consensus disorder prediction 153 194 - -
Rops6g01305 701 Pfam Domain of unknown function (DUF4378) 540 676 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01305 Rops-Chr6 28359080 28362115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01305 438 701 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 47.778 3.15e-70 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01305 - - psat:127095672 868.226