Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01299 ATGCTCTCGCTCTATCTCTCTATTGCTCCAATCGTGACGACGACGATTCCACCATCGACGAGCCTTCAAGAGAAGGAACTTCTCTTGGTGAGAAGACGATGGAGGAAGGTGAGGGACAGAACCTTCAAGAGAAGGAACTTCTCTCGGAGAGAAGACGGTGGAGGAAGTCCAATAAGGCCAACGCCCCGCGGGACGCCAAGGAGCAGGTCCTGTACAATGATCCATAGAAAATCATCGAAGGAGCTGGGTTTTAACCCTGACATTGTATCTGCTGTTGGATATGGGACTCCTCCGTGTGTCTCCAGAGAACTTGCTGAAAGCTGCACTAGCTATGTAACAACAGTTGTGATGCAGGTGCTTGCTGAAAAGCTTCCAGAACTTCTAGATTTCCACAAAGACCTAGCGAGTTTGGAGGCTGCAACCAAGATACAATTGAAATTTTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAATCCAGGAATTGACTGCATCAGAGAATGATGGGCCTGTGTCAGAAAACTTCTGCCAGGAATTCCTTTCGATCTTTGAAGCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTCTATACTTTGGAGAAGATCCGGCACGTTGCCCATTTGAACAAGTTTTGGAATTGGCTGTGGATCTCAATGGACATCAATGTGATTGTTGTCTTTAG 723 0.4633 MLSLYLSIAPIVTTTIPPSTSLQEKELLLVRRRWRKVRDRTFKRRNFSRREDGGGSPIRPTPRGTPRSRSCTMIHRKSSKELGFNPDIVSAVGYGTPPCVSRELAESCTSYVTTVVMQVLAEKLPELLDFHKDLASLEAATKIQLKFLAEEMQAISKGLEKVIQELTASENDGPVSENFCQEFLSIFEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVLELAVDLNGHQCDCCL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01299 240 MobiDBLite consensus disorder prediction 45 71 - -
Rops6g01299 240 SUPERFAMILY Formin homology 2 domain (FH2 domain) 115 225 - -
Rops6g01299 240 Pfam Formin Homology 2 Domain 116 226 IPR015425 -
Rops6g01299 240 Gene3D Formin, FH2 domain 71 231 IPR042201 -
Rops6g01299 240 PANTHER FORMIN-J 114 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01299 Rops-Chr6 28256068 28258764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01299 90 225 Protein tyrosine phosphatase (PTP) family AT5G58160 61.702 1.77e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01299 - - gmx:100791023 191.815