Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01269 ATGGAACTTGAAACCTCAGTTTCATTGCTTCTTTTCTCTGCAACTCTGGTTTGGTTCTTAGCCACAACATTATCCAAATTCCCAAGAAACAAAAACACTTCACCACCCTCTTCTTCTTCATCCACCACCACCACCATAATTCCCAAAGCTTACCCCATCATCGGTTCCGTGTTTTCCATCGCAGCCAACTTTCACCGGCGCGTGCACTGGATCTCCGATATCCTCCACGCCTCCCCCTCCTCCACCTTCGTCCTCCACCGCACCTTCGGCAGCCGGCAAGTTTTCACTGCGAACCCCACGGTGGTCCAACACATTCTGAAAACCAACTTCCCCTGCTACCGCAAGGGCCTTACTTTACACCGTGCCCTCGGTGACTTCCTCGGCGGCGGAATCTTCAACGCCGACGGCGAAAACTGGAAGTTCCAACGACAAATTTCAAGCCACGAGTTCAACACCAGATCCCTCCGGAAATTCGTCGAAAAAGTCGTCGACGGCGAACTCTCCGATCGCCTCCTCCCCTTTCTCTCCGAAGCCTCCCTCACCGGAAAAACACTCCCCGATTTCCAAGACATCCTTCAAAGATTCACGTTCGACAACATCTGCAGAATCGCGTTTGGTTTCGACCCTGAGTACCTTCTTCCCTCTCTTCGTGAAACCCCGTTCGTGAAAGCCTTCGATGACGGCACAAGAATCAGCAGCGAGAGGTTCAACGCGGCGGTTCCGTTGTTTTGGAAGATAAAGAAACTCCTCAACGTGGGATCAGAAAGGCGGTTAAGGGAAGCCATCGCCGAAGTTCGTGGCCTCGCCGGAAGAATCGTGAGGGAGAAAAAGGAGAATTCGAATCTTCAAGAAAACGAGGACCTTTTATCACGGTTTTTAAGTTCTGGTCATTCAGATGAAGCTTTTGTGACGGATATAGTTATAAGCTTTATCCTTGCAGGGAGGGACACTACCTCTGCGGCACTCACGTGGTTTTTCTGGTTACTTTCCAAACACCCACACGTGGAGAAGAAGGTACTAGAAGAAGTTAAGGGAAAATCAGAGGCGGTTGTATACGATGAAGTAAAGGATATGGTTTACACTCACGCCGCGTTGTGTGAGAGCATGAGGTTGTACCCGCCTGTGCCAGTGGATACAAAGGAGGCTGCATACGACGACGTTTTGCCAGATGGGACTTTCGTGAAGAAAGGGACAAGGGTGGCGTATCATATTTACGCTATGGGAAGGTCCGAGAAGATATGGGGACCCGACTGGGCTCAGTTTCTACCCGAAAGGTGGTTGAGTCGGGTTCAGGATGGGAAATTGAGCTTTGTGGGTGTGGATCCTTATACTTATCCAGTGTTTCAGGCGGGGCCCAGGGTCTGTTTGGGAAGGGAAATGGCGTTCTTGCAGATGAAGAGGGTGGTGGCCGGAATTATGAGGCAGTTCAGGGTGGTGCCGGCGATTGAACAAGGGATGGAGCCGGAGTACACTGCGCACCTCACATCGTTGATGGAAGGTGGCTTCCCGGTGAAAATTGAGAAGCAAAGCCACACAGATGAATAA 1545 0.5094 MELETSVSLLLFSATLVWFLATTLSKFPRNKNTSPPSSSSSTTTTIIPKAYPIIGSVFSIAANFHRRVHWISDILHASPSSTFVLHRTFGSRQVFTANPTVVQHILKTNFPCYRKGLTLHRALGDFLGGGIFNADGENWKFQRQISSHEFNTRSLRKFVEKVVDGELSDRLLPFLSEASLTGKTLPDFQDILQRFTFDNICRIAFGFDPEYLLPSLRETPFVKAFDDGTRISSERFNAAVPLFWKIKKLLNVGSERRLREAIAEVRGLAGRIVREKKENSNLQENEDLLSRFLSSGHSDEAFVTDIVISFILAGRDTTSAALTWFFWLLSKHPHVEKKVLEEVKGKSEAVVYDEVKDMVYTHAALCESMRLYPPVPVDTKEAAYDDVLPDGTFVKKGTRVAYHIYAMGRSEKIWGPDWAQFLPERWLSRVQDGKLSFVGVDPYTYPVFQAGPRVCLGREMAFLQMKRVVAGIMRQFRVVPAIEQGMEPEYTAHLTSLMEGGFPVKIEKQSHTDE* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01269 514 Gene3D Cytochrome P450 40 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 CDD CYP86A 82 502 - -
Rops6g01269 514 PANTHER CYTOCHROME P450 40 503 - -
Rops6g01269 514 Pfam Cytochrome P450 48 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 Coils Coil 265 285 - -
Rops6g01269 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g01269 514 SUPERFAMILY Cytochrome P450 48 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01269 Rops-Chr6 27881109 27882685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01269 1 513 Cytochrome P450 AT5G63450 45.577 2.88e-150 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01269 K20769 K20768 ag:AAG33645 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03073 8 68160176 68162035 Rops6g01269 6 27881109 27882685 PCT