Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01255 ATGCTGCTTGTGTTCTCTAACTCCCAAGTTCTGAGTTCTAGGGTTTTCAGCAGAGGAATCGATTCAATTTGGGGAAAAATTGAAGGGTTTCAGGATAACAGAATGCCACAGGTGGCGGATGATGGTGATGGGGGAGGTGGTGGTGGTGATGGTGATGGGGGAGGTGGTGAAGGTGGAGGAAGAGGTGGTGGTGATGGTGGTGGTGGTGGGGGAGGTGGTGAAGGTGGGGGAAGAGGTGGTGGTGATGATGATGGGGGAGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGGGGAGGTGGTGGTGGTGGTGATGGGTGCCACAAAGTTTTGATTTTGTTAAAGAAGATGGGAACCAATTTGCACCAACTACTTAGAAGCCTTTGTTTGGATACCGATTGGAAGTATGCTGTCTTTTGGAAGCTCCAACATCGTGCTAGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCCTGATAATTATGACTCTTCCAAAAATAAGTGCTTCCCGAAGACCTTTGAGCAGATTGGTGGTGGGGATTTTTCACATGACCCTCTAGGGTTAGCTATTGCAAAGATATCATATCATGTATATTCGTTAGGGGAAGGTATTATTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTGTGCAGATAACCAAGTTTCAAGTTCCGACCCGTCTTTAAAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACCATTGTTGTTGTAGCGGTAGTCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAAGTTATTGAAGATATGGGTGTTGTAACTCATATTAGAAGTCTCTTTTTGTCTACTCAAAATTACACAATAGGCTATCTTCCTAGTCAAATACAAAGTAGTGTGGCGAATTCTTCATCTCTGCTGGATGTATCCACAAATACTTTGTCTTCAGAAATTATGCCTGGTCACTCACATGATAAAGAGAAAACCATGAAGAGTGAAACACTGGATAATTTATTGTCCTTTCAATGTCCTGAGAAGAACTATTCATCTCATGCCATTTATCATGAAATGGCTGTTGACGTGGCCAAGCATGAGGGGCCAGAATTTAACAGCAACAGAAGTTCCATTTTACTTCCTTCGATGTCAAATATAATGAATGCAGAGCATCAGAAATTTGTGGGGATGAAACCTGTAAATGATGAGAGGAAGTGTGAAGGGAACTATAATGGCTGCAAAGGTACAAGTTTGAAATCAGAAAAAAATGTCTCATCATTTTTGCACAATTTGGTTATGGATAATAGCATCGATGAATTAATACGTCAATCAGAAAAATTTGGAGTTGGTCCTGCATGCTTCCCTTCAGACTTTCTTGATGCAGTTGTTTGTGAGAGTGATAAATCACATTATGTAGATATCAATCAAAAAGGGGCGTTGAATGTGCCCAGACCTTCGGATGTAAACTCCCAAAAAGATACTGAGAAGTCAATGTTTCAGACTGAGCCTTGTTACAAGGATACCTCATACACATTGAAGTTCCCTGCTGGCTATGAGCTACATGAAGCACTTGGACCAGGTTTTCTGAAAGGGAGTGAATGTTTTAATTGGGTGGGACAGGCAAATCAAGATGTTAAAACTGCTGAGATGTCAGACGAGATTAGCTGTAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGGTGACTAATGTTAGCCATAGTAATAATTATGTTAATAGTGAGTTATCATTTTCTACGTCAATGCAGGCTGCATTGACCTCAGCAAAAAATCCTGAAGCTTCTATTCATACTGTGCACACTATTAATTCAGAAGGCTATTCAATAGACCAGTCCTCTCATGTTAGAGAGGACAAACAACATAGTTTGAGTTCATCAGGGATATGTGGTGTGATATCCCCCAAAAGTTTTTCTTCTACATGTCCCAGTTCAGGTAGTAAACAGTTTGAGAGGACTTCTGAACCAGCTAAAAACAGCAAGAAGAGGGCCAGGCCTGGGGAAAGTTGTAGGCCTAGGCCAAGGGACAGACAATTGATCCAAGATCGTATTAAGGAGTTAAGAGAACTGGTGCCTAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAGTGCACAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAGCATGCTGACAAGCTAAATAAATATGCTGATACAAAGACAAAGTTGCATCACATAGAAAAAGACAATCTTGGATCCTCTGGTTATCAACAGGGTTCAAGCTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCGTTCAATATTGGTGGAGAATCTTGGCAAGAATGGGCAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAGATCGCAGAAGCCATAAGAAGCTTGGGCCTGACAATTTTGAACGGTGCAACAGAAGCTCATGGTGAGAAGACATGTATATGTTTTGTGGTCGAGGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACACTGTATTCATGA 2619 0.425 MLLVFSNSQVLSSRVFSRGIDSIWGKIEGFQDNRMPQVADDGDGGGGGGDGDGGGGEGGGRGGGDGGGGGGGGEGGGRGGGDDDGGGGGGGGGGDGDGDGDGDGDGDGDGDGGGGGGGDGCHKVLILLKKMGTNLHQLLRSLCLDTDWKYAVFWKLQHRARMILTWEDAYYDNPDNYDSSKNKCFPKTFEQIGGGDFSHDPLGLAIAKISYHVYSLGEGIIGQVAVTGKHRWICADNQVSSSDPSLKFADGWQSQFSAGIRTIVVVAVVPLGVVQLGSLNKVIEDMGVVTHIRSLFLSTQNYTIGYLPSQIQSSVANSSSLLDVSTNTLSSEIMPGHSHDKEKTMKSETLDNLLSFQCPEKNYSSHAIYHEMAVDVAKHEGPEFNSNRSSILLPSMSNIMNAEHQKFVGMKPVNDERKCEGNYNGCKGTSLKSEKNVSSFLHNLVMDNSIDELIRQSEKFGVGPACFPSDFLDAVVCESDKSHYVDINQKGALNVPRPSDVNSQKDTEKSMFQTEPCYKDTSYTLKFPAGYELHEALGPGFLKGSECFNWVGQANQDVKTAEMSDEISCSQLTSESRPEHLLEAMVTNVSHSNNYVNSELSFSTSMQAALTSAKNPEASIHTVHTINSEGYSIDQSSHVREDKQHSLSSSGICGVISPKSFSSTCPSSGSKQFERTSEPAKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSITKHADKLNKYADTKTKLHHIEKDNLGSSGYQQGSSWAMEVGGHLKVRSILVENLGKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILNGATEAHGEKTCICFVVEGQNNRNLHRLDILWPLVQLLQSKSTLYS* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01255 872 MobiDBLite consensus disorder prediction 660 676 - -
Rops6g01255 872 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 687 736 IPR011598 GO:0046983
Rops6g01255 872 MobiDBLite consensus disorder prediction 660 701 - -
Rops6g01255 872 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 131 869 IPR043561 GO:0003700|GO:0006355
Rops6g01255 872 MobiDBLite consensus disorder prediction 32 115 - -
Rops6g01255 872 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 135 296 IPR025610 -
Rops6g01255 872 MobiDBLite consensus disorder prediction 677 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01255 Rops-Chr6 27646001 27661154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01255 131 868 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.822 3.54e-153 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01255 - - gmx:100777740 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01255 6 27646001 27661154 Rops6g01255 6 27646001 27661154 ECH
Rops8g03086 8 68605797 68612810 Rops6g01255 6 27646001 27661154 PCT