Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01253 ATGTATAGGAAATCCAAGCCTCACCTTTTCATGGTCTTGGTTCAAATAGCTCTTGCACTTCTCCATTTCCTAGTAGAGGCTTCATTTAATAAAGGGATGAACCCTCATGTCTTTGTTACTTATCGGCATGCTGTTGGGGGCATAGTAGTGCTTCCTTTTGCCTATGTTCTTGAAAGAGAGGCAAGGCCAAAGTTTACAATGGCAATGTTCATGGAGCTATTTTTTCTTTCCCTCTTCGGAATCACTCTTGCCCAGAACATGTATTTTGCAAGTTTGAAATATACCAATCCTTCCTTTGTCTCATCGATGATAAACACGATCTCATCTCTTACATTTATGTTTGCACTTGGATTCAGGCTAGAGGCTGTTGATGTTAAGAACCCTCGTGGGCTGGCTAAAATCTTTGGAACTGTATTATCTTTGATTGGTGCCATGATAATGACTTTGTATAAAGGGCATACGACACAAAGCTTACAGGGTGCACCGTTCCATGTTGGAGGCAAAATGGCTCATTATAACTGGATTAAAGGATCAATTTTGACTGTTGCAAGCTGCATATCATGGTCTTTATGGTACATACTGCAGGCAATTATAGTGAAGAAATATCCAGCACAACTGTCACTAACAGCATGGATAAATTGCATGGGTGCAGTACAGTCTGCTGCTTTTACTGTACTCCTGCAACACAAACCTAGAGCATGGTCCATTACATCTGGTGTTGAACTCTGTTGCATTTTATACGCAGGAATCATATGTGGCGGTTTGATTATCTTCATTCAAATCTGGACCACGGTTCAGAAAGGGCCAGTCTTTGTGAGTATGTTTAATCCCCTTGGAACAATTTTGGTGGCAATCCTTGCATATTTTGTTTTCGGGGAACAACTCTACATGGGCAGAATACTGGGAGTAGTCATTGTTATCATTGGTCTTTACTTGCTATTATGGGGAAAAGAAAGTGATCGAGATTTCAAACCACAACAATCTTTTCCAACACATGTTGAGCACAAAGAATGCAAGACACAGATAAAGACTTCAGCTGAGCAAGAGGTAGCATAA 1056 0.4053 MYRKSKPHLFMVLVQIALALLHFLVEASFNKGMNPHVFVTYRHAVGGIVVLPFAYVLEREARPKFTMAMFMELFFLSLFGITLAQNMYFASLKYTNPSFVSSMINTISSLTFMFALGFRLEAVDVKNPRGLAKIFGTVLSLIGAMIMTLYKGHTTQSLQGAPFHVGGKMAHYNWIKGSILTVASCISWSLWYILQAIIVKKYPAQLSLTAWINCMGAVQSAAFTVLLQHKPRAWSITSGVELCCILYAGIICGGLIIFIQIWTTVQKGPVFVSMFNPLGTILVAILAYFVFGEQLYMGRILGVVIVIIGLYLLLWGKESDRDFKPQQSFPTHVEHKECKTQIKTSAEQEVA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01253 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 153 - -
Rops6g01253 351 Gene3D - 210 319 - -
Rops6g01253 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 318 - -
Rops6g01253 351 PANTHER WAT1-RELATED PROTEIN 7 321 IPR030184 GO:0016020|GO:0022857
Rops6g01253 351 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020
Rops6g01253 351 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01253 Rops-Chr6 27626409 27628600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01253 3 350 Nodulin-like Gene Family AT2G37460 37.037 4.60e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01253 - - gmx:100808275 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01253 6 27626409 27628600 Rops6g01253 6 27626409 27628600 ECH