Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01232 ATGGCCAAGGAGCAAATTCAGGTGCTAAATGCACTTGATGTGGCTAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGCTTCTTCACTGATGCCTATGATCTATTCTGCATATCACTTGTTACAAAGCTACTTGGCCGTATATATTACCATGTTGATGGAGCAGAAAAACCTGGCACATTGCCTCCTAATGTGTCAGCTGCTGTTAATGGTGTTGCTTTCATAGGAACACTTTCTGGGCAACTCTTCTTTGGCTGGCTCGGTGACAAAATGGGCCGTAAAAAAGTTTATGGAATGACTCTGATGCTTATGGTAATATGCTCCATTGCTTCAGGTCTTTCTTTTGGACATGATGCAAAGACTGTGTTGGCAACTCTTTGCTTTTTCCGCTTCTGGCTTGGTTTTGGAATTGGTGGAGACTACCCACTTTCTGCTACCATAATGTCTGAGTATTCTAATAAGAAGACTCGTGGTGCTTTTATAGCTGCAGTGTTTGCCATGCAGGGTTTTGGAATTTTGGGAGGTGGTATATTTGCTATTATAGTTTCATCTGCGTTCAAGGCCAGGTTTGATGCTCCACCATATGAGGTTGATCCTTTGGGTTCAACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTTATGGTGGGAGCACTTCCAGCTGCATTGACTTACTACTCGCGAATGAAGATGCCAGAAACTGCACGTTACACTGCCTTGGTTGCTAAGAATATGGAACAAGCTGCAGCAGATATGTCTAAGGTTATGCAGATGGAGATTCAAGCTGAACCAAAGAAGGAGGAGCAGGCAAAAGGTAAAAATTCATATGGATTGTTCTCCAAGGAGTTCCTTAGTCGCCATGGACTTCATCTACTTGGAACAACAAGCACTTGGTTCTTGCTTGATATTGCATTTTACAGTCAAAATCTCTTCCAAAAAGATATCTTCAGTGCAATTGGTTGGATCCCTTCTGCAAAGACCATGAATGCACTTGAGGAGGTTTTCAGAATTGCAAGGGCTCAAACTCTTATTGCTCTATGCAGTACAGTTCCTGGCTATTGGTTCACAGTGGCCCTCATTGATAAGATGGGAAGATTTACTATCCAGTTGATGGGGTTCTTCTTTATGACTGTCTTTATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCATAAAGAGAACAGAATTGGATTTGTGGCCATGTATTCCCTCACCTTCTTCTTCGCAAACTTTGGCCCTAATGCTACCACATTTGTTGTGCCAGCTGAGATTTTCCCAGCTAGATTCAGATCCACTTGCCATGGAATATCATCAGCAGCAGGGAAGCTTGGAGCTATGGTTGGTGCATTCGGGTTCTTGTATTTGGCACAGAACCAGGACAAGAGCAAAACAGATGCAGGGTACCCTGCAGGTATTGGTGTGAGGAATTCACTGCTTGTGTTAGGTGTTGTTAATATTTTGGGCTTCCTCTTTACTTTCTTGGTGCCTGAGGCAAAGGGAAAATCTCTTGAGGAGATCTCAGGTGAGGATGAAGAAGAAGTTGAAACCAAGGTATGA 1575 0.4305 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVSAAVNGVAFIGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVICSIASGLSFGHDAKTVLATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIVSSAFKARFDAPPYEVDPLGSTVPQADYVWRIILMVGALPAALTYYSRMKMPETARYTALVAKNMEQAAADMSKVMQMEIQAEPKKEEQAKGKNSYGLFSKEFLSRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPSAKTMNALEEVFRIARAQTLIALCSTVPGYWFTVALIDKMGRFTIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVAMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAMVGAFGFLYLAQNQDKSKTDAGYPAGIGVRNSLLVLGVVNILGFLFTFLVPEAKGKSLEEISGEDEEEVETKV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01232 524 CDD MFS_PhT 25 505 - -
Rops6g01232 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 504 - -
Rops6g01232 524 NCBIfam phosphate:H+ symporter 11 515 IPR004738 GO:0005315|GO:0006817|GO:0016020
Rops6g01232 524 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Rops6g01232 524 Gene3D MFS general substrate transporter like domains 20 524 IPR036259 -
Rops6g01232 524 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops6g01232 524 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
Rops6g01232 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01232 Rops-Chr6 27234640 27237744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01232 1 521 Inorganic Solute Cotransporters AT3G54700 84.837 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01232 K08176 - gmx:100786638 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01232 6 27234640 27237744 Rops6g01232 6 27234640 27237744 ECH
Rops6g01232 6 27234640 27237744 Rops8g03095 8 68725839 68728877 PCT