Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01222 ATGGTTTCGCTTTCGACATGGTTTCGTTACGTTGCTCACAGGCTCGAATACTCCGTCTCTCTCGGCTGGAAGAACTATAAAGGAGGTCAAATTACAGACAGAGAGCTAGGTGATGTTGTTTGGAAAAACTTCTTTCAAGGAAAACTGACATACTTGCACTGGAATAAAGGAGAGGAGATGGCCCCTACTATTGCTGGAAAAGGGGTAACTCTTCTTGTTCGCAAATTACCAGCTGCAGACCCAACGCGTGTTTTTGTAGGAGATGTTGTGGTCTTGAAGGACCCTGAGAAGCCAGATAACCACCTAGTCAGAAGATTAGCTGCGACTGAAGGTTATGAAATGGTTTCTAATGATGAAAAGGATGAACCATTTGTTCTTGCGAAGAATCAATGCTGGGTAGTGGCTGAAAATGAAAAATTGAAGCCCAAGGAAGCAAATGATAGTCGATCATTTGGTCCAGTTCACATGACAGACATTGTGGGCAGAGTCATATACTGCCTGCGAAGTGCAGTAGACCATGGTCGTATACCCAACAGTCATTTCAGCATGCAAAAGGATTCACCAGTGTTGGAAGTGGAACTTGATGTTGATGAGATGGCAAAGAGTCACAAAGCCTAG 618 0.4401 MVSLSTWFRYVAHRLEYSVSLGWKNYKGGQITDRELGDVVWKNFFQGKLTYLHWNKGEEMAPTIAGKGVTLLVRKLPAADPTRVFVGDVVVLKDPEKPDNHLVRRLAATEGYEMVSNDEKDEPFVLAKNQCWVVAENEKLKPKEANDSRSFGPVHMTDIVGRVIYCLRSAVDHGRIPNSHFSMQKDSPVLEVELDVDEMAKSHKA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01222 205 SUPERFAMILY LexA/Signal peptidase 57 176 IPR036286 -
Rops6g01222 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 205 - -
Rops6g01222 205 Gene3D Umud Fragment, subunit A 49 183 - -
Rops6g01222 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01222 60 174 MADS-box Gene Family AT1G29960 28.689 8.08e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01222 - - ahf:112738901 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01222 6 27117211 27123307 Rops6g01222 6 27117211 27123307 ECH