Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01194 ATGAAGATTTCAAAGGGAACATTAATGCGTTGGTGGTTATATACGGCTCAGAAGAAACCAGAATCCAAAGGTGGATATATAGTGCCCGGTAAATACATTGATTCAGTTGCTATGGCCTCAAAAACCATGGTTGCAGGCTTAACCACTGGTTCTCACTCCCGAAATGGACTCCATTTCTCCCACTCTGACTCTGATGAGGAAAATGGAGACTACAACCAACATGGTCAAACTTTCTCTGTAGCTGGAAGTGTTGCTAGTAAGGATTTTGAAGAGCAGAAAGCATTCTATGGCAATGCAGAGAAACGGAAAGAAAGAAAAGAAAAGAGAAGTTTAATGAGCAATGACCAAGAAGAAGATGACTACCTTTTGGCTGAGGCAAGGCAACCATTGTGGCGCAAAGTGCCAATATCTTCAAGCCTAATCAACCCATATCGCATAGTCATAGTGATGCGTCTCGTCATCCTAGTTTTCTTCTTCCAATTCCGCATCTTAAATCCAGTATATGATGCATTGGCCTTATGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCTTTGTCTTGGATAGTGGACCAATTCCCTAAGTGGTTCCCCATAACTCGTGAAACTTACTTGGAGCGCTTGTCCATAAGGTTTGAGCGTGAAGGGGAACCAAACCTTCTAGCCCCAGTTGATGTCTTTGTGGCCACTGCAGACCCTTTGAAGGAACCACCTATTATAACAGCAAACACGGTTCTATCAGTGTTGTCTGTTGATTACCCTGTTGACAAAGTTAGCTGCTATGTCTCAGATGACAGTGCATCTATGCTTCTCTTTGATACCTTGTCAGAAACTGCTGAGTTTGCAAGAATATGGGTTCCTTTTGTTAACCAGTATGACATTGAGCCACGGGCGCCTGAGTTTTATTTCTCACAGAAAGTTGATTACTTGAAAGATAAGGTGCACCCCACATTTGTAAGGGATCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGTATTGGTTGCAAAGGCTCAGAAAAAACCAGAAGATGGGTGGGTGATGCAAGATGGTAACCCATGGCCTGGAAACAACTCAGACAATCATCCAGGAATGATCCAGGTGTGTCTGGGAAGTGCTGGTGCACTGGATAATGAAGGAAGGGAACTGCCCAGGCTTGTGTACGTATCACAGGAAAAACGTCCTGGCTATCAACACCACATGAAAGCTGGTGCCATGAATGCTTTGGCTCGAGTTTCTGCTGTGCTTACAAATGCACCTTTTGTGTTGAATCTGGATTGTGACCAATACATCAATAATAGCAAGGCTCTTCGGGAGGCTATGTGCTTCTTCATGGACCCCCAACTTGGAAAGAAGATCTGTTTTGTCCAATTTCCGCGAAGGTTTGATGGCATCGATTTCAATGATAGATATGCTAATCACAGTACTGTATTCTTTGATATCACCATGAAATGCCTTGATGGGATTCAAGGTCCAGTGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGCTATAAGCCACCATCTGAGAAAAGGCCAAAGGTGAGCAGTCACTGCTGGCCTTCATGCTGCTGCTGCTGTTCTGGTGACTCTCAGTCCACATTTGATGTTGAAGAGATTGATGAAGGGCTTGAAGGCTTTGATGAGCAAGACGAATCATCCTTCATGTCCCTGAAAAATTTGGAGAAACGATTTGGACTGTCACAGGTTTTCATTGCTTCTGCTATGATGGAAGATGGCGGACTTCCAAAAGGCACCAACACCAGACTACTTATGAAGGAAGCCATTCATGTTATAAGTTGTGGCTACGAAGAGAAAACTGAATGGGGCAAAGAGATTGGGTGGCTTTATGGCTCAGTCACAGAAGACATCTTAACTGGGTTTAACATGCATTGCAGAGGATGGAAATCAGTATACTGCATGCCTAAGAGAGCAGCTTTTAAGGGATCTGCTCCTATAAATCTATCAGACCGCTTACACCAAGTTCTGAAATTGGCTTCGGGTTCTACTGAGATTTTCTTTGGTGGCTATTGCCCATTGTGGTATGGCTATAGTGGAAAACTGAAATGGCTACAGAGGCTGGCTTACACTAATGCCATCGTTTATCCATTTACTTCCATCCCTCTGCTGGTATACTGTACAATTCCAGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCATTCTGACAGACCTTGGTAGCATGTGGTTAATGGCTCTATTTATCTTTATCATTTTAACTTGTGTACTAGAGCTTCGTTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGATTATTGGAGGTGTTTCTGCACATCTTTTTGCTGTATTTCAAGGTCTCCTTAAAGTTGCTGGAGTAAACACTAATTTCACTGTGAGAGCAAAATCAGCAGATGACACTGTATTTGGACAGCTCTATCTCTTCAAGTGGACTACTCTTCTCATCCCACCAACGAGTCTTGTGATCTTGAATATGGTGGGAATTGTGGCTGGAATCTCTGATGCCATTAACAATGGCTATGACTCATGGGGACCTTTATTTGGGAAGCTTTTTTTCTCCATATGGGTCATTGTGCACTTATATCCTTTCCTCAAAGGTCTAATGGGAAGGCAAAACAGAACCCCTACCATTGTAGTTCTCTGGTCAACACTTATAGCATTAATATTCTCAATGATTTGGGTGCAAATTGATATTTTCTTGCCTAAGCAAACTGGTCCAGTACTCAAACAATGTGGTATAGAATGCTAA 2793 0.43 MKISKGTLMRWWLYTAQKKPESKGGYIVPGKYIDSVAMASKTMVAGLTTGSHSRNGLHFSHSDSDEENGDYNQHGQTFSVAGSVASKDFEEQKAFYGNAEKRKERKEKRSLMSNDQEEDDYLLAEARQPLWRKVPISSSLINPYRIVIVMRLVILVFFFQFRILNPVYDALALWIISVVCEIWLALSWIVDQFPKWFPITRETYLERLSIRFEREGEPNLLAPVDVFVATADPLKEPPIITANTVLSVLSVDYPVDKVSCYVSDDSASMLLFDTLSETAEFARIWVPFVNQYDIEPRAPEFYFSQKVDYLKDKVHPTFVRDRRAMKREYEEFKVKINVLVAKAQKKPEDGWVMQDGNPWPGNNSDNHPGMIQVCLGSAGALDNEGRELPRLVYVSQEKRPGYQHHMKAGAMNALARVSAVLTNAPFVLNLDCDQYINNSKALREAMCFFMDPQLGKKICFVQFPRRFDGIDFNDRYANHSTVFFDITMKCLDGIQGPVYVGTGCVFNRQALYGYKPPSEKRPKVSSHCWPSCCCCCSGDSQSTFDVEEIDEGLEGFDEQDESSFMSLKNLEKRFGLSQVFIASAMMEDGGLPKGTNTRLLMKEAIHVISCGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKLASGSTEIFFGGYCPLWYGYSGKLKWLQRLAYTNAIVYPFTSIPLLVYCTIPAVCLLTGKFIIPILTDLGSMWLMALFIFIILTCVLELRWSGVSIQDWWRNEQFWIIGGVSAHLFAVFQGLLKVAGVNTNFTVRAKSADDTVFGQLYLFKWTTLLIPPTSLVILNMVGIVAGISDAINNGYDSWGPLFGKLFFSIWVIVHLYPFLKGLMGRQNRTPTIVVLWSTLIALIFSMIWVQIDIFLPKQTGPVLKQCGIEC* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01194 930 SUPERFAMILY Nucleotide-diphospho-sugar transferases 239 738 IPR029044 -
Rops6g01194 930 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 333 515 IPR029044 -
Rops6g01194 930 Pfam Cellulose synthase 224 923 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops6g01194 930 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 127 897 - -
Rops6g01194 930 FunFam Cellulose synthase 341 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01194 Rops-Chr6 26753756 26769318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01194 115 930 Cell Wall Biosynthesis AT5G17420 69.745 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01194 K10999 - gmx:100777278 1542.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01194 6 26753756 26769318 Rops6g01194 6 26753756 26769318 ECH