Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01184 ATGCAGATGAAAACTCAGTTTTTCTTCTTCTTCATCTGTTGCATTTCCTGTTTCTCATATGGTTTTGCTGCTGCAGCTAGTGATGAAGCAGCTGCTTTACTATCTATAAAAGAAGCTCTCATTGATCCATTGAATAGTCTACAAAATTGGAAATTGTTGGAGAAAGCAGCAGGGAAGGATGCAGCTCAAGCACATTGTAACTGGACTGGTGTCCAGTGCAATTCATTTGGAGCAGTGGAGAATCTTGATCTCTCCCACATGAATCTGAGTGGCAGTGTGTCCAATGAGATACGAAGGCTAAAAAGTCTCACTTCTCTCAACTTGTGCTGCAATGAATTTTCATCATCGTTGTCAAAATCCATAGCCAATCTCACCTCACTCAAGAGTCTTGATGTGAGCCAGAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAAGGTATCAGGACTTATGACCTTAAATGCATCCAGCAACAACTTCTCTGGTTTTCTTCCTGAGGATCTTGGAAATGTCTCTTCCTTAGAGACACTGGATCTCAGAGGCAGTTTCTTTGAAGGGTCAGTTCCAAAATCCTTTAGTAACTTGAGTAAGTTGAAGTTCCTTGGTCTATCTGGGAATAATCTCACTGGGGAGATCCCAGGAGAGATGGGACAACTTTCATCACTTGAGTATATGATCATTGGATACAACCAATTTGAAGGTGGGATTCCAGCGGAGTTTGGAAATCTCACCAAGCTGAAGTATCTTGATTTAGCAGAAGGCAATCTTGGTGGTGAAATTCCAGCTGAGTTGGGAAAGCTCAGATTATTGAATACAGTTTTCTTATACAAGAACAATTTTGAAGGCAAGATTCCACCAACAATTGGAAACATGACTTCATTGGTGCAACTGGATCTCTCAGATAACATGTTATCTGGGAATATTCCAGCCGAAATAAGTCAGCTGAAGAATTTACAGCTTCTCAACTTCATGCGCAACCAGTTATCTGGTCCTGTGCCTTCTGGCCTTGGGAATTTGCCTCAACTAGAGGTGCTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCCAGTGACCTTGGCAAGAATTCACCACTGCAGTGGTTAGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGAATCACTTTGCACCAAGGGCAATCTCACCAAGCTTATACTTTTCAATAATGCTTTCTTGGGTCCAATTCCAGCTAGTCTATCAACATGTCCTTCACTTGTTCGTGTTCGAATTCACAACAATTTTCTTTCTGGGACAATTCCTGTGGGTTTTGGTATGCTTGGGAAGCTTCAGAGGTTAGAATTGGCTAACAATAGTCTCACTGGTGAAATTCCTAATGACATTGCTTCTTCCACATCCCTTTCTTTCATAGATTTCTCCAGAAACAAGCTCCATTCTTCTCTTCCTTCAACCATTATTTCCATTCCAAATCTGCAAACTTTCATTGTTTCCAACAACAACTTGGAAGGTGAAATCCCAGGCCAATTCCAGGACTGTCCCTCACTTGGTGTCCTTGATCTCTCATCAAATCATTTCTCTGGAAGCATTCCAGCAAGCATTGCTTCATGTCAGAAATTGGTCAAATTGAACCTACAGAACAATCAATTGACTGGTGACATCCCAAAAGCAATAGCAAGCATGCCTACTTTAGCCATTCTTGATCTTGCTAACAACTCTCTAACTGGTCAAATACCTGAAAGCTTTGGTATGTCCCCAGCTCTAGAAACATTCAATGTCTCACACAACAAGCTAGAAGGTCATGTCCCAGAAAACGGTGTGCTAAGAACAATAAACCCAAATGATCTCGAGGGCAATGCTGGCCTATGTGGTGGTGTCCTCCCTCCATGTGACCAAAACCTTGCATATTCATTAAGGCATGGGAACTCACATGCAAAGCACATTATTGTAGGATGGCTAATTGGAATATCATCAACCATAGCCATTGGGGTTGCAGCTTTGGTAGCAAGATCTATATACGTAAGGTGGTACACTGAAGGATTGTGCTTCCGAGGAAGATTTTATAAAGGCAGCAAAGGGTGGCCCTGGAGATTGATGGCATTTCAAAGGCTTTATTTTACAAGTACTGACATTTTATCCTGCATCAAGGAAACAAATGTGATTGGCATGGGTGCAACTGGGGTTGTTTATAAGGCTGAGATACCCCAATCAAGTACAGTTGTGGCAGTAAAAAAATTGTGGAGATCAGAATCTGATATTGAAGTAGGAAATAGTGATGATCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTTAGACTACTAGGCTTTCTTTATAATGACACTGATGTGATGATAGTTTATGAATTCATGCACAATGGAAACCTTGGAGATGCCTTGCATGGTAAACAAGCAGGGAGATTGCTTGTAGATTGGGTTTCAAGGTATAACATAGCTCTAGGAATTGCACAAGGACTTGCTTATCTTCATCATGACTCTCATCCACCTGTTATCCATAGAGACATCAAGTCAAATAATATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGGTTAGCCAAGATGATGCTCCAGAAGAATGAATCAGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCAGAATATGGATACTCCTTGAAGGTGGATGAAAAGATTGACATTTATAGCTATGGAATAGTTCTGTTGGAGCTTCTCACTGGAAAGCGACCTTTAGATCCGGAGTTTGGTGAATCTATAGACATTGTAGGGTGGATTAGAAGGAAGATAGACAACAAATCTCCAGAAGAAGCACTAGATCCCAGTGTAGGAAACTGCAAGCATGTTCAAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTATGCACTGCCAAGCTCCCCAAGGACAGACCCTCCATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCTAGGAGAAAGAGTGGTATGAGCAATGAAACATTTGCAGCTAACAAGGAGATGCCAGTTATTAGTTCATCACCAGTTAATGGCCTTCTGTAG 3060 0.4163 MQMKTQFFFFFICCISCFSYGFAAAASDEAAALLSIKEALIDPLNSLQNWKLLEKAAGKDAAQAHCNWTGVQCNSFGAVENLDLSHMNLSGSVSNEIRRLKSLTSLNLCCNEFSSSLSKSIANLTSLKSLDVSQNFFIGDFPLGLGKVSGLMTLNASSNNFSGFLPEDLGNVSSLETLDLRGSFFEGSVPKSFSNLSKLKFLGLSGNNLTGEIPGEMGQLSSLEYMIIGYNQFEGGIPAEFGNLTKLKYLDLAEGNLGGEIPAELGKLRLLNTVFLYKNNFEGKIPPTIGNMTSLVQLDLSDNMLSGNIPAEISQLKNLQLLNFMRNQLSGPVPSGLGNLPQLEVLELWNNSLSGPLPSDLGKNSPLQWLDVSSNSLSGEIPESLCTKGNLTKLILFNNAFLGPIPASLSTCPSLVRVRIHNNFLSGTIPVGFGMLGKLQRLELANNSLTGEIPNDIASSTSLSFIDFSRNKLHSSLPSTIISIPNLQTFIVSNNNLEGEIPGQFQDCPSLGVLDLSSNHFSGSIPASIASCQKLVKLNLQNNQLTGDIPKAIASMPTLAILDLANNSLTGQIPESFGMSPALETFNVSHNKLEGHVPENGVLRTINPNDLEGNAGLCGGVLPPCDQNLAYSLRHGNSHAKHIIVGWLIGISSTIAIGVAALVARSIYVRWYTEGLCFRGRFYKGSKGWPWRLMAFQRLYFTSTDILSCIKETNVIGMGATGVVYKAEIPQSSTVVAVKKLWRSESDIEVGNSDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDVMIVYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGIAQGLAYLHHDSHPPVIHRDIKSNNILLDANLEARIADFGLAKMMLQKNESVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGIVLLELLTGKRPLDPEFGESIDIVGWIRRKIDNKSPEEALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSGMSNETFAANKEMPVISSSPVNGLL* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01184 1019 ProSiteProfiles Protein kinase domain profile. 710 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01184 1019 Pfam Leucine rich repeat N-terminal domain 27 74 IPR013210 -
Rops6g01184 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Rops6g01184 1019 SMART serkin_6 710 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01184 1019 Pfam Protein kinase domain 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01184 1019 FunFam Leucine-rich repeat receptor protein kinase EMS1 285 367 - -
Rops6g01184 1019 PANTHER UNNAMED PRODUCT 175 919 - -
Rops6g01184 1019 SUPERFAMILY Protein kinase-like (PK-like) 692 985 IPR011009 -
Rops6g01184 1019 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 368 629 - -
Rops6g01184 1019 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 184 284 - -
Rops6g01184 1019 SMART LRR_typ_2 196 220 IPR003591 -
Rops6g01184 1019 SMART LRR_typ_2 292 316 IPR003591 -
Rops6g01184 1019 SMART LRR_typ_2 556 579 IPR003591 -
Rops6g01184 1019 SMART LRR_typ_2 244 268 IPR003591 -
Rops6g01184 1019 SMART LRR_typ_2 100 123 IPR003591 -
Rops6g01184 1019 SMART LRR_typ_2 484 507 IPR003591 -
Rops6g01184 1019 SMART LRR_typ_2 436 460 IPR003591 -
Rops6g01184 1019 SMART LRR_typ_2 340 364 IPR003591 -
Rops6g01184 1019 FunFam MDIS1-interacting receptor like kinase 1 795 1004 - -
Rops6g01184 1019 Pfam Leucine Rich Repeat 174 196 IPR001611 GO:0005515
Rops6g01184 1019 Pfam Leucine Rich Repeat 438 457 IPR001611 GO:0005515
Rops6g01184 1019 Gene3D Transferase(Phosphotransferase) domain 1 795 1009 - -
Rops6g01184 1019 FunFam MDIS1-interacting receptor like kinase 1 710 794 - -
Rops6g01184 1019 Gene3D Phosphorylase Kinase; domain 1 710 794 - -
Rops6g01184 1019 SUPERFAMILY L domain-like 76 470 - -
Rops6g01184 1019 Pfam Leucine rich repeat 485 545 IPR001611 GO:0005515
Rops6g01184 1019 Gene3D Ribonuclease Inhibitor 231 388 IPR032675 -
Rops6g01184 1019 Gene3D Ribonuclease Inhibitor 389 629 IPR032675 -
Rops6g01184 1019 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 183 - -
Rops6g01184 1019 ProSitePatterns Protein kinases ATP-binding region signature. 716 740 IPR017441 GO:0005524
Rops6g01184 1019 Gene3D Ribonuclease Inhibitor 150 219 IPR032675 -
Rops6g01184 1019 Gene3D Ribonuclease Inhibitor 28 149 IPR032675 -
Rops6g01184 1019 SUPERFAMILY L domain-like 390 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01184 Rops-Chr6 26607779 26611101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01184 1 1019 Receptor kinase-like Gene Family AT1G08590 60.328 0.0 1184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops6g01184 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01184 - - gmx:100788430 1778.84