Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01177 ATGGCGCTGTGGATGGAAAAGGGTTCTGAGCCCTTAACCGAAAGTGAGAAGGCAGACCTAGAAGCCATTGCTGCACTCAAAGAATCTGCAGCTTTGGAATTTAAGGAAAAGGGTAACCAATATGTGAAGATGGGTAAGAAGCATTACTCTGATGCCATTGATTGTTACACAAGGGCAATCAATCAGAAAGCCTTGAGTGACTCTGAAAGCTCTATTCTTTTTGCAAATAGAGCCCATGTGAATTTGCTGCTAGGCAATAATAGATATGCTCTCACAGATGCTCAGGAGGCAATCAAGTTGTGCCCCTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCATCACTCTCATTAAATTTGTTGGCTGAAGCACAAGACTATTGTCAAAAGGGTCTTCAGTTGGACCCCAATAATGAGGAATTGAAGAAGCTTGATAGGCAGATTGGTGTGAAGATAGCAGAAAACCAAAAGCATGAGGCTGAAGTATCCAAGGCTGTTGCAGAGGCAAAGGAACTTGTGTCTGCAATAGAACATAGAGGCTTGAAGATTGGAAAGGCAATGTATCAAGAACTAACTGGATTAAAGAAACCTGTGTTGGACAAAAATAATATCCTTCATTGGCCTGTTCTTCTTCTGTATGCAGAGGTTATGTCCAGTGATTTCATTGAGGATTTCTGCGAGACTGACATGTTTTCAGTTCATCTTGATATGATATCCTTTTCTGTGAAATGGTTTATACGTATTATATGTAAATGA 756 0.4021 MALWMEKGSEPLTESEKADLEAIAALKESAALEFKEKGNQYVKMGKKHYSDAIDCYTRAINQKALSDSESSILFANRAHVNLLLGNNRYALTDAQEAIKLCPSNIKAIYRAAKASLSLNLLAEAQDYCQKGLQLDPNNEELKKLDRQIGVKIAENQKHEAEVSKAVAEAKELVSAIEHRGLKIGKAMYQELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFSVHLDMISFSVKWFIRIICK* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01177 251 Coils Coil 141 175 - -
Rops6g01177 251 Gene3D Tetratricopeptide repeat domain 25 151 IPR011990 GO:0005515
Rops6g01177 251 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 238 - -
Rops6g01177 251 SMART tpr_5 31 66 IPR019734 GO:0005515
Rops6g01177 251 SMART tpr_5 105 138 IPR019734 GO:0005515
Rops6g01177 251 SMART tpr_5 71 104 IPR019734 GO:0005515
Rops6g01177 251 CDD CTWD_Cns1-like 170 238 - -
Rops6g01177 251 SUPERFAMILY TPR-like 22 144 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01177 30 160 Calmodulin-binding Proteins AT3G25230 33.803 2.48e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01177 K24927 - gmx:100783179 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01177 6 26510548 26512245 Rops6g01177 6 26510548 26512245 ECH