Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01170 ATGCCAACCTATCTCATCTTCTCCTTCTTCTTCGCTTTCCTTCACTTGCTGCTTTTCTCTTGCTCAGGTTCTTTTCCTGCAGCAAAGTTGGTTTCCATGAGTGTGTCACTTGCTTCATCTGAACAAGCTAAAATGTGGTTAGTTAAACCTTCTTCCGAGCCATCTTCTGCTCCTGTGCCATCTCTGTCTTATCAAGGTCCTTGTGTGGCTCCAAGACCAAAACATCCTCATCATCAGACTGTGGCTCCATCCCCTTCTGAATACCAAGCTTGTGGCCAAATCTGTATGGATCCACTCACAGCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAATCAGACTTGTACTAGATGCAGCTCCTTTGATTGTTTTTCCGGTAATTAATGAGTTAGAGATTGAAGTTGCATCTGGGACATATTTGAAGCAAAGCCAGGTCAGGATAATGGGTGTCAGTGCTGACATTCAAAATCCGAGAAGAACAGTAGTTGATATTAACTTGGTTCCACTTGGAGAGAAATTTGACAAGACCACTGCAGTTCTGACATATGAGAGGTTTTGGCACAAGAAAGTTCCTCTAAATAAGAGTCTTTTTGGTGATTACACAGTCTTGTACACTACTTATCCAGGGATGCCGTCACCACCGCCACAGGGAACCTTAGATGGGAGTCATTTCGGTCCCGGTGAAAGTGCTGAAGGTATTATCCCATTCACTGCCACCTTTATCAGCAAGAACGAGAAATTGAATCTCAGAACCATAATCATCATCGCTTCATCTTCCATTTTACTCTTGCTGGTTTTGGTTGGAGCATTTTCCATCTTTTTTAAATGGAGGAAAATTGGGAGACCATCAAGTGCTGTTGGCCCTGCATTCACGTCGTCTCTAAACAAGCGATCTGCCATGGAGTCTATGTTGTCAAGCAGAATTACAAGCTCAAGATCAATGTCCCTTGTGTCTACCATGGCTAATTCTGTTCTCTCTGTTAAAACATTTTCCCTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCACAAAGAGTATTAGGAGAAGGAGGATTTGGGCGTGTTTATTGTGGGACATTGGATGATGGAAGTGATGTTGCAGTTAAGCTACTAACAAGGGATAATCGGAATGGAGACCGTCAATTTATCGCGGAAGTTGAGATGCTATGCCGTTTGCATCATCGTAATCTTGTGAAACTCATTGGTATATGCATTGAAGGGCGCAGGCGTTGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTTGAGTCTCATTTGCATGGTGTTGACAAGAAAAGCAGTCCTCTAGATTGGGAAGCACGGACAAAAATTGCCCTTGGAGCTGCAAGAGGATTGGCCTATCTTCATGAGGATTCTATTCCTCGTGTAATTCACCGAGACTTCAAAGCTAGCAACGTGTTGTTAGAAGATGACTTTACCCCGAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGAAGGAAGTCATCATGTTTGTACAAGGGTCATGGGTACTTTTGGATATGTTGCCCCAGAATATGCAATGACGGGCCATTTACTTGTTAAAAGTGATGTCTATAGTTATGGTGTTGTGCTGCTTGAACTTCTAACAGGCAGAAAACCAGTGGACATGTCTCAACCTGCTGGACAGGAGAATCTTGTAACATGGGCACGGCCACTGTTGACAAGTAAAGAGGGTTTAGAACAGCTGGTGGATCCATCTTTGGCGGGAACTTATGACTTTGATGACATGGCAAAGGTGGCTGCTATTGCTTCAATGTGTGTACACCCAGAGGTCACTCAAAGACCTTTTATGGGTGAAGTTGTGCAAGCTCTTAAGTTGATATACAATGACAGAGATGAGACCAATGTGGACTGCTTTAGTTGGAAAGAGTCTTCTTCTGATTTTAGAGGTGACTATGCCTATTCTGATAACAGCAGTTGGTGGAATGCTGAAGGGTTGACCCCTGGATTAGCTTATGGGCAGGCATCTCCCTTCCTCACAATGGAACACAGTTCTGGTCCACTTGAAGTGGAAAAGAGACCCTTTTCAGCTTCAAGCTTAATTGGAGATGAGATATCTTTACCAATTAGGCATGGGAATAGATCAGGTCCCTTGAGAACATCCCGAAACAAGCAATCCTTCTATAGGTTTAGTGGAAGTCGGAGTGAACATGCAGTAGTCCCTTCCAAACGTGTTTGGAATGATGATAACTGGGCTTAA 2241 0.4346 MPTYLIFSFFFAFLHLLLFSCSGSFPAAKLVSMSVSLASSEQAKMWLVKPSSEPSSAPVPSLSYQGPCVAPRPKHPHHQTVAPSPSEYQACGQICMDPLTATPFGSPCGCVFPMKIRLVLDAAPLIVFPVINELEIEVASGTYLKQSQVRIMGVSADIQNPRRTVVDINLVPLGEKFDKTTAVLTYERFWHKKVPLNKSLFGDYTVLYTTYPGMPSPPPQGTLDGSHFGPGESAEGIIPFTATFISKNEKLNLRTIIIIASSSILLLLVLVGAFSIFFKWRKIGRPSSAVGPAFTSSLNKRSAMESMLSSRITSSRSMSLVSTMANSVLSVKTFSLSELEKATDKFSSQRVLGEGGFGRVYCGTLDDGSDVAVKLLTRDNRNGDRQFIAEVEMLCRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGVDKKSSPLDWEARTKIALGAARGLAYLHEDSIPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHVCTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPLLTSKEGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDRDETNVDCFSWKESSSDFRGDYAYSDNSSWWNAEGLTPGLAYGQASPFLTMEHSSGPLEVEKRPFSASSLIGDEISLPIRHGNRSGPLRTSRNKQSFYRFSGSRSEHAVVPSKRVWNDDNWA* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01170 746 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01170 746 Gene3D Transferase(Phosphotransferase) domain 1 422 640 - -
Rops6g01170 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Rops6g01170 746 SUPERFAMILY Protein kinase-like (PK-like) 329 624 IPR011009 -
Rops6g01170 746 Gene3D Phosphorylase Kinase; domain 1 318 421 - -
Rops6g01170 746 FunFam receptor-like serine/threonine-protein kinase ALE2 319 421 - -
Rops6g01170 746 CDD STKc_IRAK 352 621 - -
Rops6g01170 746 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Rops6g01170 746 Pfam Protein tyrosine and serine/threonine kinase 348 618 IPR001245 GO:0004672|GO:0006468
Rops6g01170 746 PANTHER OS01G0750732 PROTEIN 84 637 - -
Rops6g01170 746 FunFam Receptor-like serine/threonine-protein kinase ALE2 422 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01170 Rops-Chr6 26442508 26450324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01170 94 645 Receptor kinase-like Gene Family AT5G56890 56.842 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops6g01170 PK_Tyr_Ser-Thr 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01170 - - gmx:100792309 1107.82