Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01156 ATGCTCATGGACCAAGAAATGTCCAAAGAAAAAGACTCCAAGCACAACCCACCAAATGTAATTGCCAAATTGATGGGGCTTGAAGCCCTTCCAAAGGGAGAGCCTAATTTATCTGTGGTGAGAAGCAATAGAAAAGATTATTCTCAACATATGCATGGTCATTTGGGGTGGCCATTCAAACATTGGCAGCTGAAAGATAGGTCTATGGATAAGGAATTCCTTCATGAAGTTCATCCAAGCACAAAACAGATTGCTTACAAAGATGTCTATGAAATGCGGCAGCAATCTCAGAGAGCAAGCCATGTAAGAGACAAGATACCAGAAAGGGGAAGGAGGATTGAAGATGTTGATGAGGAAAAAATGGCTCTCATTCGTCAGAAATTTATGGAAGCAAAACGTCTTTCAACAGATGAGAGACTGCGCCAGTCCAAACAATTTGAAGATGCCTTGGAAGTTTTAAGCTCCAATAATGATCTCTTAATCAGGTTATTGGATTCACAAAATCATTATGAACATCACTCTACCCCACCAGATGAGACAAAGCGCATTACTCTTATCAAACCTTTTAAGATGGTTGACAAGGACAAATTTGCTGAAAAGGGGAAGAAGAATGATAGACTGATTAAGAAACCAGCAAATGATGATCAAGCAACTGTATGGGAGAACAAGAATCCTGGATACTCTCCAGAAAGTCAAAAAGTTGATGAGTTTCCGGTTCAATCTACTCGAATAGTGGTATTGAAGCCTAGCCCTGGGAGGACAAATGAGCTTAAGGATGTTGTTTCTCCAACAAATTCATCACTTCGAAGTCTGCAAAGTGGAAAATTTTATCATGGACCTGAAGACGATGATGTACTGGAATCCATGAAAGTGGCAAAAGAGAGTACACAGCAAATGCATGAAGGCCCAAAGAGGAGCTATCAAAAGCACAAAACTTTATATTCTTCTTCAGTCTTTTCCAATGGCTATTCTGGTGATGAGAGTTCATTTAACAAATCATATCATGAGTATACAGCTGGGAATTTCAGTGATTCAGAAGCTATGTCACCATTGCCAAGGCTTTCATGGGATTACATCAATGGCTGTGGCAGTCCTTATTCTACACTATCCTTGGGTCGTGCATCCTTTTCTCCGGAGTCATCAGTGTGCATTGAGGCAAAGAAACGACTTTCTGAAAGATGGACCATGATGACATCAACTAATAAAGGTCGTCAAGAGCAAAGGCATGTGCAAATACGCTCTACCTTGGGTGAGATGCTTTCTCTTACCCGTGTAAAGAAATCTGTAACATCTGAGGTTGAGAGTATTAATGAAGACCAAGAACCAAGCAAATCTGTTTCTTGCAGTCATTCTTTCAATGAAGAAATAAGCATTGGTAGTTCTCTTAAAAACATTCCCATGTCAAATTCTGTTCCTGCATCTTCTGCTGTACATGAAAATGGGATCAGTGTTGAGGTTTGTGATCATGATGCTGGCAAAGAACATGGCTCCAAGGTGCAGGCAAGGTCAAAGAGTATGAGGTCATCATTTAGAGGGAAAGTTGCCAGTTTCTTGTTTTCAAGGAATAAGAAATCATCCAAGAAAAAGTCTAGTCCATCTCAATCTGAAGATGAATCCCAATCTTCTGTCAGTGAAACATCAGATGTGCCAGTAAATTCTCCTGGAGTCCTTAGGGATGATGTGTCTCAAATCTCCAATGTTAGCGGGTTTGAAGAGTGTTCTCTTGCAGCTCTATGTGAATCATCGGGCAAAACTACAGCAGATTCAGTCTCAAGTGGACAACAGCAAGACATGATTACAATAGAGCCTGGATTGACCGAGTCCAAGCCCGTGATCCCAGAGATTTCAAGTGAAAACCAGGATCAGCCTAGTCCAATCTCAGTGTTAGAACCTCCATATGAAGATTACAATGCAGCTCATGAGTCCTTGGACTGCATGAAGGGTGGTCACCTGGGATCGCGGGTGCCTTTGAAGTCCAATTTGATTGACAAATCACCACCTATAGAATCAGTAGCTCGGACCCTTTCATGGGATGACTCTAGTGCAGAAATAGCAAGTCCTTATCCATTAAAATCCCAAAGGGTTTCTTCGTTAGACCCCAAGGTAGAGGAACAAGAGTGGCTTCTCTTGGTCCAGAAACTACTATCAGCAGCTGGACTTGATGATCAAGAACAGTATGATTCATTTCACACTAGATGGCATTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATATGCCAATGTGAATTACAAGGACCCTCGGCCTCTCCATGAGGCTAGGAGAAGGAAGATGAGATCAAATCAGAAGCTTGTATTTGACTGTGTCAATGCTGCACTATTGGAAGTTGTTGGTTATGGATCAGATAATTACTTCAAGAGCAGGATGTACAGTGGGAGCCACAGCAGGCCCCAAGTCCAAGAGGGTGCATCTCCCTTATTGGTGGACCACATTGTGGCCCAAATGAAGGAATTAATAGCAAGTGGGGCGAGGTGTGTGGGGGAGGATTGTGGGGACAACCACAGCCTGGTGGTAGAAAATGTTGTCAGGAAAGAGCTTGTGAGGATAGGGTGGGTTGAGCTTATGAGATTGGAGATTGATATTTTGGGGAGGGAAATAGAAGGGAAGTTGGTGGAAGAGCTCGTGGAAAATGCTGTGGTTGATTTTACAGGCAGGGCCTGA 2688 0.4263 MLMDQEMSKEKDSKHNPPNVIAKLMGLEALPKGEPNLSVVRSNRKDYSQHMHGHLGWPFKHWQLKDRSMDKEFLHEVHPSTKQIAYKDVYEMRQQSQRASHVRDKIPERGRRIEDVDEEKMALIRQKFMEAKRLSTDERLRQSKQFEDALEVLSSNNDLLIRLLDSQNHYEHHSTPPDETKRITLIKPFKMVDKDKFAEKGKKNDRLIKKPANDDQATVWENKNPGYSPESQKVDEFPVQSTRIVVLKPSPGRTNELKDVVSPTNSSLRSLQSGKFYHGPEDDDVLESMKVAKESTQQMHEGPKRSYQKHKTLYSSSVFSNGYSGDESSFNKSYHEYTAGNFSDSEAMSPLPRLSWDYINGCGSPYSTLSLGRASFSPESSVCIEAKKRLSERWTMMTSTNKGRQEQRHVQIRSTLGEMLSLTRVKKSVTSEVESINEDQEPSKSVSCSHSFNEEISIGSSLKNIPMSNSVPASSAVHENGISVEVCDHDAGKEHGSKVQARSKSMRSSFRGKVASFLFSRNKKSSKKKSSPSQSEDESQSSVSETSDVPVNSPGVLRDDVSQISNVSGFEECSLAALCESSGKTTADSVSSGQQQDMITIEPGLTESKPVIPEISSENQDQPSPISVLEPPYEDYNAAHESLDCMKGGHLGSRVPLKSNLIDKSPPIESVARTLSWDDSSAEIASPYPLKSQRVSSLDPKVEEQEWLLLVQKLLSAAGLDDQEQYDSFHTRWHSLESPLDPSLRDTYANVNYKDPRPLHEARRRKMRSNQKLVFDCVNAALLEVVGYGSDNYFKSRMYSGSHSRPQVQEGASPLLVDHIVAQMKELIASGARCVGEDCGDNHSLVVENVVRKELVRIGWVELMRLEIDILGREIEGKLVEELVENAVVDFTGRA* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01156 895 MobiDBLite consensus disorder prediction 488 508 - -
Rops6g01156 895 Pfam Protein of unknown function (DUF3741) 125 168 IPR022212 -
Rops6g01156 895 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 894 - -
Rops6g01156 895 MobiDBLite consensus disorder prediction 257 273 - -
Rops6g01156 895 MobiDBLite consensus disorder prediction 251 282 - -
Rops6g01156 895 MobiDBLite consensus disorder prediction 521 557 - -
Rops6g01156 895 Pfam DUF761-associated sequence motif 11 32 IPR032795 -
Rops6g01156 895 MobiDBLite consensus disorder prediction 535 551 - -
Rops6g01156 895 Pfam Domain of unknown function (DUF4378) 711 885 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01156 Rops-Chr6 26301891 26306174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01156 2 892 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 39.542 7.60e-159 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01156 - - gmx:100787955 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01156 6 26301891 26306174 Rops6g01156 6 26301891 26306174 ECH
Rops8g03181 8 69899498 69904945 Rops6g01156 6 26301891 26306174 PCT