Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01146 ATGTACGCTTTTAATGTCGTCCACGACGACTTTGACCCGACGCCAGATCCGACGAGAAATGGACATCCTCCGGTGAACGGACTCCCCTCACGTGGTTCAGTTCCACGGGTTCTTCAAGAAATTGGAGACGTGTGCTTCATGATGGAGTACATGGATTTTGGCTCGTTGAAGAACAAGGGGACGTTGTCAGAAATACAGTTGACGACAGTGGCGCGTCAGGTTCTGAGCTACTTCCATGTGCACAAGATCATACATCGTGACATAAAGCCCTCAAACCTTCTGGTGAATGGGAAAATGGAGGTGAAGATAGGGGGTTTCGGAGTGAGAAAGGTGATGTGTTAG 342 0.4912 MYAFNVVHDDFDPTPDPTRNGHPPVNGLPSRGSVPRVLQEIGDVCFMMEYMDFGSLKNKGTLSEIQLTTVARQVLSYFHVHKIIHRDIKPSNLLVNGKMEVKIGGFGVRKVMC* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01146 113 MobiDBLite consensus disorder prediction 9 32 - -
Rops6g01146 113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Rops6g01146 113 Pfam Protein kinase domain 39 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01146 113 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01146 113 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 39 111 - -
Rops6g01146 113 SUPERFAMILY Protein kinase-like (PK-like) 37 111 IPR011009 -
Rops6g01146 113 Gene3D Transferase(Phosphotransferase) domain 1 32 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01146 Rops-Chr6 26172315 26172656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01146 42 112 MAP Kinase Kinase Gene Family AT3G06230 52.703 4.08e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Rops6g01146 Pkinase 1.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01146 K20604 - csin:114288490 105.531