Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01143 ATGGCTGACACCACTCCAATTGTTCCTCCTCTCAACAACTCCGGCGCTGTTACGGAATCATCTTGTTTCCAAAGAACGGTTTCCTTATACGATTGGTGGCTGATTAAAGCTGAAAACGACTTCCAAGGAAAGCGTTTAGCAGTTGCAGGCTTCTCATCCAGAAAGGAAGAAGCGAGGAGGGTGTTTGTTTCCGCTCCTGTTATCAAAAGATATGATGTGTTTTCTCTTGAGACTGCGGATGGTGTTTACGTTATCATCAGTGGTTTCATTAACGAGCAGCGCACACTTGAAAATGGTTTTGCCCCTGAGGTTTTCGACCATTTTTTATTTGGATTTCCTCCAAATTGGGAAAGCTACGCTCTAGGTTATTTCAGAGAAGAATCAACTGCTGGCGTTGATTTGGGCAATGCTGTTCCTGATAATGTATCAGCAATTCATCCAGAAATCTTATCTGATGGTGTGGAAAAATCTATTCCTACTTCTTTGGTATCACCAGAAGAGACCTCAGGAGATCGTGAGATGCCATTACCTGAAGATGAATGCAATATGTCCAAGGAGATGGGTGGGGTTAATGTTGTTTATGGTAGTGGTGGGAATAGATGTAGTGCCCTGTTGTGTAATGTTAAAGTCTGCCAGCAGAAGAAGCCTGCTTCTGGAGGTTCTCCGAAGCATCCAGATAAAGAGTGGAGCTTTACCTCAATGGCCTTGGAGAATCGTGATTTGGGTACTGCTGTTCCTGATAATGTATCAGCAAGTCGTCCAGAACTAATATCTGATGACATGGAAAAATCCATTCCTACTTCTTTGGTATCACCAGAAGAGACCCTGGGGGATCGCGAGAAGCCATTCCCTGAAGATGAAAGCAATATGTCTAAGGAGATGGGCGGGGCTAATGTTGCTAAAGGTAGTGGTGGGAATAGACGTAGTATCCGGTTGCATAATAGTAAAGTCTGCCAGCAGAAGAAGCAGCCTGCTTCTGGAGGTCCTTCAAAGCATCCAGATAAAGAGCAGAGCCCTACCTCAGCGGTCTTGGAGAATGATGATGGAGAAGGACCGAAAAGTCCAGTGACACCTATACAGTCACATTCAAAAGGGCTAGTAAATACATTGTCTGAACAGCTCGTTAAAAAATCTGCATCTAGAATTTCTAGAACTTTGTCACCAAAAACTTATAAGAAAAAGGGAGTAACTGCTAAAACAAAAGCGGTCAGGCCTGAGAGAAAAATGACTAAATCTGCATCTGCTGTGAAATCTCCACGAGAAAGGGATGTAAGTCGCTTGCACAAGGGAAGCAAACAGAATATGTCTTCAGTTTCTCCAGAGTCATCGAGTTTCAGAAAATCCAGATCTGGTAGGTTGCTTCTACCTCCCTTGGAGTTTTGGCGCAATCAAATACCAGTTTATAATGCGGACCATGAGGTTACAGGAATTCAGGAAGGCGCATCTTTCGTATCACCTTGTAGAGGTTCATCACCATCATTGAGCCGGTTCAGCAATCAGAAACGTGTTGCATGA 1515 0.4383 MADTTPIVPPLNNSGAVTESSCFQRTVSLYDWWLIKAENDFQGKRLAVAGFSSRKEEARRVFVSAPVIKRYDVFSLETADGVYVIISGFINEQRTLENGFAPEVFDHFLFGFPPNWESYALGYFREESTAGVDLGNAVPDNVSAIHPEILSDGVEKSIPTSLVSPEETSGDREMPLPEDECNMSKEMGGVNVVYGSGGNRCSALLCNVKVCQQKKPASGGSPKHPDKEWSFTSMALENRDLGTAVPDNVSASRPELISDDMEKSIPTSLVSPEETLGDREKPFPEDESNMSKEMGGANVAKGSGGNRRSIRLHNSKVCQQKKQPASGGPSKHPDKEQSPTSAVLENDDGEGPKSPVTPIQSHSKGLVNTLSEQLVKKSASRISRTLSPKTYKKKGVTAKTKAVRPERKMTKSASAVKSPRERDVSRLHKGSKQNMSSVSPESSSFRKSRSGRLLLPPLEFWRNQIPVYNADHEVTGIQEGASFVSPCRGSSPSLSRFSNQKRVA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01143 504 MobiDBLite consensus disorder prediction 242 449 - -
Rops6g01143 504 MobiDBLite consensus disorder prediction 484 504 - -
Rops6g01143 504 MobiDBLite consensus disorder prediction 399 429 - -
Rops6g01143 504 MobiDBLite consensus disorder prediction 308 326 - -
Rops6g01143 504 MobiDBLite consensus disorder prediction 274 288 - -
Rops6g01143 504 MobiDBLite consensus disorder prediction 482 504 - -
Rops6g01143 504 MobiDBLite consensus disorder prediction 356 386 - -
Rops6g01143 504 Pfam SANTA (SANT Associated) 27 119 IPR015216 -
Rops6g01143 504 MobiDBLite consensus disorder prediction 430 449 - -
Rops6g01143 504 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 10 481 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops6g01143 SANTA 3.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01143 - - gmx:100790080 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01143 6 26100599 26104457 Rops6g01143 6 26100599 26104457 ECH