Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01127 ATGGAGAACCACCAAACACAAAATTGGTTTGGAAGAGCGAAACCTTTCATAGCTGTGTTATCTTTGCAGTTTGGATATGCAATTATGGATGTTATATCCAAGGTTGCAATGAACAAAGGGATGAGCAATTATGTATTCTGCGTGTATCGCCATGCTGTTGCATTTTTTGTCATAGCCCCTTTTGCATTATATTTTGACAAGAAAGTAAGGCCAAAGATGACATTATCAATCTTTGTGAAGATAGTGGCACTCAGCTTGCTAGAGCCAGTTATTGACCAGAATTTGTACTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCCGTTGCCATGATCAATATCCTTCCTGCCATTACTTTTGTTTTGGCTTGCTTTCTTAGGCTTGAGAAGATAAAAATAAAAAGTATACGCAGCCAAGCAAAGGTGGTGGGAACTTTAACAACTGTTTCAGGAGCCATGATCATCACAATGATGAAAGGGCCAATACTTTTTGGAAAACACGGAAGCAATGACCACAACCAGCATCATGATGGGACAAGTACTCAACATTTAATAGCGGGATCCGTGATGATTATAATTGGATGCTTTAGTTGGGCTTGTTTTGTGATCCTCCAAGCTATTACCCTTAAAACCTACCCTGCTTCACTATCTCTTTCCTCATGGATATGCCTATTAGGCTCACTTGAAGGTGCTGCAGTGGCTCTGGTTATGGAAAGGAGCAACCCTTCAGTTTGGGCTATAAAATGGGATATTGCTCTGCTCTCTGCTGTCTACACTGGCATTGTCTGCTCAGGACTAGGTTATTACTTGCAAGGAGTAGTGCTAAAAACCAGAGGCCCAGTCTTCGTAACAGCATTTAGCCCCTTCTGCTTGGTAATTGTGGCTATCATGGGCTACTTCATTCTCAACGAGCAAATGTTCCTTGGAAGGGTGATTGGTGCACTTGTCATTTGTTTGGGCCTGTACCTTGTTGTGTGGGGCAAAAGCAAAGATTATAGTCCACCAAGTCCAATTATCCAAGAGCCTACAATGCCAACTAAGCAAACTGCATATGAAGACAATGCTAAGAACGAACATTGTACTCACGACGTCATTACTGTTCAGTAA 1107 0.4173 MENHQTQNWFGRAKPFIAVLSLQFGYAIMDVISKVAMNKGMSNYVFCVYRHAVAFFVIAPFALYFDKKVRPKMTLSIFVKIVALSLLEPVIDQNLYFLGMKYTTATFAVAMINILPAITFVLACFLRLEKIKIKSIRSQAKVVGTLTTVSGAMIITMMKGPILFGKHGSNDHNQHHDGTSTQHLIAGSVMIIIGCFSWACFVILQAITLKTYPASLSLSSWICLLGSLEGAAVALVMERSNPSVWAIKWDIALLSAVYTGIVCSGLGYYLQGVVLKTRGPVFVTAFSPFCLVIVAIMGYFILNEQMFLGRVIGALVICLGLYLVVWGKSKDYSPPSPIIQEPTMPTKQTAYEDNAKNEHCTHDVITVQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01127 368 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Rops6g01127 368 Pfam EamA-like transporter family 17 136 IPR000620 GO:0016020
Rops6g01127 368 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
Rops6g01127 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 135 - -
Rops6g01127 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01127 Rops-Chr6 25872946 25876844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01127 1 368 Nodulin-like Gene Family AT2G37460 61.081 2.03e-163 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01127 - - gmx:100811147 584.334