Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01117 ATGGAGAAATCCCGCCACCGCAAGTCCAACGTTGCAGCCATGAATCAACCTCAACCACCTCTTCCTCAAGGGAACAAGCAGGTTCATAGACAGCAACAACCTCCGAATTTGTCTCCGGATTCCGGTTCTTCCAGTGGTGGGGTTGCAGACAAAGATTCGTCCGCCTTTAAATTCGGCTGGAGATCTTCTAAACAATTGTTTGGAACTCCAATTAAGAAGTTATTAGCTGAAGAGATGTCACCAAAAACTGAATCCAAAAGAAGATCCCCCGGTGTTATCGCCAGATTGATGGGTCTTGATGGGCTGCCCTTTCAGCAGCCTGCTAATAAGCAGGGCAAGGGTTTGTCAGAAAGCCATCTACATAGGACAACACAGTTAGAGAAAACTCGAAGCAAAGGAATTACGAATGATGGCAGATCGTCTAGGAGAAGCTCAAAGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCGGAGATCCCGAAGGTAGAGAGTGGAAGGTATTCATCCAACGGGTGTGTAGACTTGAATACCGCCGAAGCTGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTTATCAGGATTTACAGTCTTCAAAAGATTTCCGTGATACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTTAAGCGACCAGATTCAATGTTTAAAAAACATTTGAATGATCTGCAAGCTGCCCCTCTCCAATCACATTCCGGTCACATAGAAGCTACGAATATTGAGAAGTATGAACATGACTTCAATTGGAGGTCTGATAGGGAGACAACACATTTGAATTACAATAGATTTCATCAGAAGCATCATGATGGTTATCCTTGCCAATTTGAGAAAAGACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAGTTTAAGGGTAGTCATGAACAAGATGCAGTCCCCACAAGGATTGTTGTCCTAAAACCTAATCTTGGAAAAGTGCAGAATGGTACCAGAATTGTATCACCACCTTGTTCTTCACACAATTTTCTGTCAGAGCATGGAAATCACAAAGAAGTTTCAGATGTCAGATTTAGAGACACTAAATTGTATCAAATGTCAAATGTGCCTGATAATGCCAGGTCTTTTAGGCACGGTTCTTTGGAATCCAGAGAACTTGCAAGGGAAATCACTAGGCAAATGAAAAATAGTTTGAACAATGGTCGTGTGATCGTTTCCTCTTCTAGATTTAGAGGATATTCTGGGGATGATAGTTCATGTAGTGTTTCTGGGAATGAATCTCTTGAGGAATCAGAGGAAACAGCAGCAACTTTGGGAAACTCATTTGACCTAAATAATCATAGCAGGCGGTCATCCCATTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATAGCACACAAGTCTCAAGAAGTGCAGGTCATCAGCAGGAGCAGCACACTGGCTGACATGCTTGCCAACCCTGATAAGGAAATGAAGGCTGCTAATGTTGATAGCATGGCAAGTGGGGTAGGTTTCCATGATAAATTGGCTCGCAAAGGTGAACCTGCTGGGTGGGTTGAGCCACTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGATGTATTGGAAGTTTGTCAAGGTCAAGATCTCTTCCTACTTCATCTACTGCATTGGGAAGTCCTAGACATTTCTTGCACAGTGAAGCACTTCATGATGATCGATTTATGGTGCCAAAGGAATCCCTTAAATGGGAGAGGAGAAGAGCCACAAAGAGTCTTGATCATAGACATGGTGTGAATGCTAGAAGCACAAAATCTAGACACAAGAAGTCTCGGTCTCTGCATTCATCGAAGCTGGAAGTTAATGAGTTTTCTCCAGACTTAAATACAATTCAGAATAAAATGAAGAATAATCTTGAAGAAGATTCACCCAAGCTAGAGGTTCTGGCCACTGAATCCGTCACTGAGACCCTCAGAGGTGCAACTGCAGTTACTGATGATTTGGATGTGGCAAATGAAAATGAGGTTGGGTCTTCTGAACCTTCTTCTGATAAGTTTCTTCCTGAATTATCTTCTTGTGTCTTGATAGAAGGCGACAGTAACATTGTCAACGAAGACAATTCACCGCAGCAGGACCTGTCAGCTGGATCTTATGGTGGAAGTTCAGTCTTCTCCGAACCACCTGTACCTGGACTTGAATCTTCATGCTGCAAAGATGCTGATCAACCCAGTCCAGTCTCGGTCCTGGAACCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAGTGCTGACCTGCAAGGGCTGCGAGCGCAACTCCAGTTGCTGAAGTCGGATTCTGAAGAATGTGTGGAGGGACCCATACTAATTTCAAGTGATGAAGATGGTGGGGAAGCATCTACTGGAATGATAGGAGAAAATGGATTAAGTAGAACTGAAGATAGCTGGGAGTCTTCATACATTATTGATGTCTTGTCTGAATCTGGATTTGAGGGGGCTCAGCCTGATACAATTTTGGAAGTTTTGCATTCTCTTGAATGCCCCATTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTGTGACTGGACTACTTGTTCAAGGTCAGAAAGGAGATTGCTTTTTGACTGTATAAATTCAGGAATTGTCAAGATCCACGGGCAATCTACATATGCAAAACCATGGGTGGGTCTTGCAACCATAAATATTGATTCTAAGTTGATAAAAAATGGGCTCCAAGATGGTCTTTACAGGATGCTAGGGAGCCAAGGCCAAGTGAAGGATGATGCTCTGGGGAAGGTGCTGGTTATGGAGTCAGAGTGGTTGGACTTAAGAGATGACATTGATGTGATAGGCAGAGAAATAGAGAGATTGTTATTAGATGATATAGTGGCAGAAATAGCAGGTAACTAG 2952 0.4272 MEKSRHRKSNVAAMNQPQPPLPQGNKQVHRQQQPPNLSPDSGSSSGGVADKDSSAFKFGWRSSKQLFGTPIKKLLAEEMSPKTESKRRSPGVIARLMGLDGLPFQQPANKQGKGLSESHLHRTTQLEKTRSKGITNDGRSSRRSSKDQQEFKDVFEVSEIPKVESGRYSSNGCVDLNTAEAEMSFIEQKFMDAKRLATYQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSMFKKHLNDLQAAPLQSHSGHIEATNIEKYEHDFNWRSDRETTHLNYNRFHQKHHDGYPCQFEKRHVMHSSPKSSKLQFKGSHEQDAVPTRIVVLKPNLGKVQNGTRIVSPPCSSHNFLSEHGNHKEVSDVRFRDTKLYQMSNVPDNARSFRHGSLESRELAREITRQMKNSLNNGRVIVSSSRFRGYSGDDSSCSVSGNESLEESEETAATLGNSFDLNNHSRRSSHSSESSVSREAKKRLSERWKIAHKSQEVQVISRSSTLADMLANPDKEMKAANVDSMASGVGFHDKLARKGEPAGWVEPLGISSRDGWKDGCIGSLSRSRSLPTSSTALGSPRHFLHSEALHDDRFMVPKESLKWERRRATKSLDHRHGVNARSTKSRHKKSRSLHSSKLEVNEFSPDLNTIQNKMKNNLEEDSPKLEVLATESVTETLRGATAVTDDLDVANENEVGSSEPSSDKFLPELSSCVLIEGDSNIVNEDNSPQQDLSAGSYGGSSVFSEPPVPGLESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSADLQGLRAQLQLLKSDSEECVEGPILISSDEDGGEASTGMIGENGLSRTEDSWESSYIIDVLSESGFEGAQPDTILEVLHSLECPISLSVFDELEKRYCDWTTCSRSERRLLFDCINSGIVKIHGQSTYAKPWVGLATINIDSKLIKNGLQDGLYRMLGSQGQVKDDALGKVLVMESEWLDLRDDIDVIGREIERLLLDDIVAEIAGN* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01117 983 MobiDBLite consensus disorder prediction 709 728 - -
Rops6g01117 983 MobiDBLite consensus disorder prediction 103 150 - -
Rops6g01117 983 Pfam Domain of unknown function (DUF4378) 830 979 IPR025486 -
Rops6g01117 983 MobiDBLite consensus disorder prediction 115 150 - -
Rops6g01117 983 MobiDBLite consensus disorder prediction 596 625 - -
Rops6g01117 983 PANTHER AFADIN 25 981 - -
Rops6g01117 983 MobiDBLite consensus disorder prediction 709 732 - -
Rops6g01117 983 Pfam Protein of unknown function (DUF3741) 187 231 IPR022212 -
Rops6g01117 983 MobiDBLite consensus disorder prediction 1 53 - -
Rops6g01117 983 Coils Coil 176 196 - -
Rops6g01117 983 MobiDBLite consensus disorder prediction 10 50 - -
Rops6g01117 983 MobiDBLite consensus disorder prediction 417 468 - -
Rops6g01117 983 Coils Coil 771 791 - -
Rops6g01117 983 MobiDBLite consensus disorder prediction 417 458 - -
Rops6g01117 983 Pfam DUF761-associated sequence motif 84 103 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01117 Rops-Chr6 25705447 25711903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01117 68 981 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.536 1.27e-137 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01117 - - ccaj:109788117 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01117 6 25705447 25711903 Rops6g01117 6 25705447 25711903 ECH