Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01114 ATGTCCCGCCACTCTCCTCCGCCACCCTCGGTTTCAAGTTTAACCGCAACACCTCCGAGCATCAATGCATGCATCGAAGAAGCAGAAGCAGTGATACTAAAATGGAACCCGGAAACTTCCACATACGCCAAAGTTACCTCTCTCTTCTACGACAACAAAACAGAGGCAATGCACTTCATCCAGTGCGTTAACCAACTCCAAAAAGCCTTGCACTCGTTGTACTCACATAACAAATCCTCACAGGAACTCATTCACTTACACAACCTAATGCAAATGGCAATGAAAAGACTCCAGAAAGAGTTCCACCAGATCTTATCAATGAACCGGGCCCACCTCGACCTCGAATCTGTCTCAACCTCAACTAGATCATCATTTTCTTCATACGACGCCACACCGGAGGAAGATGTTCGCGCCGCAGGGGATTCAATCTCCGAAGTAGAACGTGTTTCTTCCGATGCCATGGCGGATCTGAGATCCATCGCTGATTGCATGGTTTCTAACGGTTACGCCAAAGAATGCGTGAGCGTTTACACCGCTGCGAGAAAATCGATCGTTGACGAAGCAATTTATAGCCTCAACATGGAGGAATTGAGTTTCTCGAAGGTGAACAAGATGGACTGGGAAGTGCTCGAGTTGAAAATCAACAGTTGGTTAGACGCCGTTAAGATTTCTGTTAGGACACTCTTCGCCGGTGAGAGGATCCTCTGCGATCAAGTCTTCGGTGCTTCACAATCCGTCCGAGAAGCTTGCTTCGCCCAGATTTCAAGAAATGGAGCCACTCTTCTGCTCCGATTCCCCGAACTCGTCGCCAAAAAGAAGAAATCGCCACCGGAGAAGATTTTCCGCTTGCTTGATATGTACGCTGCAATCGCCGCGCTGTTGCCGGAGATTGAATCAATCTTCTCGTTTGGTTCAACCGACGCTGTTAAATCTCAAGCCTTTGATTCACTTCTCCGACTCACTGAGTCCGTAAGAACGATTCTCTACGAATTCGAGTTCGCACTCCAGAAAGACTCTTCCAAATCGCCGGCTAACTTTGGCGGTGTTCATTCCCTGACAACGCGAACAATGAAGTTCCTCTCTACTCTCGCAGATTACAGCAACGTGTTCTCTGAAACATTCTTGGACATTCCTTCGCCACCGAAGTCACGGTTGCCGGAATCCTACTTACACAGTGCAGAATCCGATAATGCGACGGCGACGGCGTTTTCGGTGTGGATGGCGTGGCTGATTCTGGTCCTTCGTCGCAAGATCGATGGCAAATCGAAGCACTGCAAGGAAGTTTCGTTGTCTTACCTGTTTCTCGCAAACAATCTCCGGCACGTGGTGGCCAAGGTTCGCACCTCGAACTTGCGTAACGTACTGGGCGATGATTGGGTGTTGAAGCACGAAGCTAAGATGAAACGGTTGATGGCGAAGTACGAGAGAGTAGTCTAG 1437 0.4892 MSRHSPPPPSVSSLTATPPSINACIEEAEAVILKWNPETSTYAKVTSLFYDNKTEAMHFIQCVNQLQKALHSLYSHNKSSQELIHLHNLMQMAMKRLQKEFHQILSMNRAHLDLESVSTSTRSSFSSYDATPEEDVRAAGDSISEVERVSSDAMADLRSIADCMVSNGYAKECVSVYTAARKSIVDEAIYSLNMEELSFSKVNKMDWEVLELKINSWLDAVKISVRTLFAGERILCDQVFGASQSVREACFAQISRNGATLLLRFPELVAKKKKSPPEKIFRLLDMYAAIAALLPEIESIFSFGSTDAVKSQAFDSLLRLTESVRTILYEFEFALQKDSSKSPANFGGVHSLTTRTMKFLSTLADYSNVFSETFLDIPSPPKSRLPESYLHSAESDNATATAFSVWMAWLILVLRRKIDGKSKHCKEVSLSYLFLANNLRHVVAKVRTSNLRNVLGDDWVLKHEAKMKRLMAKYERVV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01114 478 Gene3D Exocyst complex component Exo70 40 478 - -
Rops6g01114 478 SUPERFAMILY Cullin repeat-like 25 476 IPR016159 -
Rops6g01114 478 Pfam Exo70 exocyst complex subunit 216 476 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops6g01114 478 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 477 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01114 Rops-Chr6 25689124 25690560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01114 20 477 EXO70 exocyst subunit family AT3G09520 54.624 4.83e-171 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01114 K07195 - gmx:100798477 641.343