Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01092 ATGGCAACTATTGGCGTGCAACAAGTTCGTCCTCCCCCTTTGACTTCAACTTCTGACCCACCTCCACTTTTTGATGGAACAACCAGGTTGTACACCAGTTACAGTTGCCCTTTTGCTCAACGTGTATGGATCACTAGGAACTACAAGGGGCTCCAAGACAAGATCCAATTGGTTCCCATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCCTTGGAGCACAATGGCAAGGTTTTGGGAGAAAGTATTGATTTGATCAAATATGTAGATGCCAATTTTGAAGGGACACCTCTATTTCCCAGTGATCCTGCCAAGAAAGAGTTTTCTGAGCAGTTGATATCTCATGTTGATACATTCACCAGAGACCTGTTCTCTTCATTGAAAGGGGATGCTGTACAACAAGCTAGTCCTGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGTCAGTTCAGTCTGGTGGATATTGCCTATATTCCGTTTGTTGAAAGATTCCAAGTTGTCTTTGCTGATGTGTTAAAGCATGACATCACGGAAGGAAGGCCTAAACTTAGAACATGGATTGAGGAGTTGAACAAGATTGATGCCTATACACAGACAAGAGTTGATCCTCAGGAAATAGTTGATCTTTTCAAGAGACGTTTCCTGCCTCAACAGTAA 714 0.4272 MATIGVQQVRPPPLTSTSDPPPLFDGTTRLYTSYSCPFAQRVWITRNYKGLQDKIQLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESIDLIKYVDANFEGTPLFPSDPAKKEFSEQLISHVDTFTRDLFSSLKGDAVQQASPAFEYLENALGKFDDGPFLLGQFSLVDIAYIPFVERFQVVFADVLKHDITEGRPKLRTWIEELNKIDAYTQTRVDPQEIVDLFKRRFLPQQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01092 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Rops6g01092 237 Gene3D Glutaredoxin 1 104 - -
Rops6g01092 237 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Rops6g01092 237 MobiDBLite consensus disorder prediction 1 22 - -
Rops6g01092 237 SFLD Main (cytGST) 29 210 - -
Rops6g01092 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Rops6g01092 237 CDD GST_C_Lambda 112 230 - -
Rops6g01092 237 SUPERFAMILY Thioredoxin-like 20 108 IPR036249 -
Rops6g01092 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 233 IPR044629 GO:0004364
Rops6g01092 237 Gene3D - 105 236 - -
Rops6g01092 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Rops6g01092 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Rops6g01092 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Rops6g01092 237 FunFam Lambda class glutathione S-transferase 105 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01092 Rops-Chr6 25436694 25455331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01092 10 234 Glutathione S-transferase Gene Family AT5G02790 68.000 1.24e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01092 K00799 - gmx:547597 432.95