Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01091 ATGGCAACTATTGGCGTGCAACAAGTTCGTCCTCCACCTTTGACTTCAACTTCTGATCCACCTCCACTTTTTGATGGAACCACCAGATTGTACATCAGTTACAGTTGCCCCTTTGCTCAACGTGTATGGATCACTAGGAACTACAAGGGGCTACAAGACAAGATCCAATTGGTTCCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCCTTGGAGCATAATGGCAAGGTTTTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCCAATTTCGAAGGGACACCTCTATTTCCCAGTGAACCTGCCAAGAAAGAGTTTGCTGAGCAGTTGTTATCCCATGTTGATACATTCACCAGAGACCTGTACACTGCATTGAAAGGGGATGCTGTGCAACAAGCCAGTCCTGCTTTTGAATACCTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGTCAACTCAGTCTGGTGGATATTGCCTATATTCCGTTTGTTGAAAGATTCCAAGTTGTCTTTGCTGATGTGTTCAAGCATGACATCACGGAAGGAAGGCCTAAACTTAGAGCATGGATTGAGGAGTTGAACAAGATTGATGCTTATACAAAGACAAGAGTCGATCCTCAGGAAATAGTTGATCTTTTCAAGAGACGTTTTCTGCCTCAACAGTAA 714 0.4314 MATIGVQQVRPPPLTSTSDPPPLFDGTTRLYISYSCPFAQRVWITRNYKGLQDKIQLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPSEPAKKEFAEQLLSHVDTFTRDLYTALKGDAVQQASPAFEYLENALGKFDDGPFLLGQLSLVDIAYIPFVERFQVVFADVFKHDITEGRPKLRAWIEELNKIDAYTKTRVDPQEIVDLFKRRFLPQQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01091 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Rops6g01091 237 Pfam Glutathione S-transferase, C-terminal domain 140 207 - -
Rops6g01091 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Rops6g01091 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Rops6g01091 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 233 IPR044629 GO:0004364
Rops6g01091 237 MobiDBLite consensus disorder prediction 1 21 - -
Rops6g01091 237 Gene3D Glutaredoxin 1 104 - -
Rops6g01091 237 CDD GST_C_Lambda 112 230 - -
Rops6g01091 237 SFLD Main (cytGST) 29 210 - -
Rops6g01091 237 FunFam Lambda class glutathione S-transferase 105 236 - -
Rops6g01091 237 Gene3D - 105 236 - -
Rops6g01091 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Rops6g01091 237 SUPERFAMILY Thioredoxin-like 20 108 IPR036249 -
Rops6g01091 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01091 Rops-Chr6 25433922 25452628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01091 10 234 Glutathione S-transferase Gene Family AT5G02790 68.889 1.32e-120 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01091 K00799 - gmx:547597 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03256 8 71061761 71078121 Rops6g01091 6 25433922 25452628 ECH
Rops6g01091 6 25433922 25452628 Rops6g01091 6 25433922 25452628 ECH
Rops8g03256 8 71061761 71078121 Rops6g01091 6 25433922 25452628 PCT