Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01086 ATGGCGAGTAGTGAATGTTCTGAGCTGTGTCAGCGATTTAGCATAAAGACAACGAAGCATCATCGTTTCTGGTTCTGGATGTTCATGTTCAAGGAAAGGGGTGTCCAGATGAGTGTCGATGGTGACAGCAAAGAGCTGAGCGAACTGAGTCAGCAGTTACGGGATGGGAAGAAGACTTTTAAGGAAGGAGTTGCTGGTGCTGAGGAACACAGTCTATGTGAGGATGATGAAGTGAAATGTAATGGGGTTGCTGAAGAAGTTAAGGTTGGGCAGGGGGGGAATGTGGATTCCCCTTCTGTCCAGCAGCATATACCACAGCAACAGCCTCAAGGGGCAATGATTTGTTGGGAGAGGTTTTTACATATTAGATCCCTCAAGGTCTTGCTTGTGGAGATTGATGACTCTACCCGCCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTAGTTTTAACAGAGGTAGCAATGCCTGGCTTATCAGGCATTGGTCTTCTATACAAGATTATGAGCCACAAAACACGGCAAAATATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGGAGATGTCATAGTTCTAGTGGTAGTGGCAGTGAAAGCGGCACACAATCTCAGAAGTCTGTAAAATCAAAAAGTCTTGAGAAGTCTGATAATAATTCTGGAAGCAATAACGTGGATGACAATGGAAGTATAGGCTTGAATAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGTTCCTGGACCAAACAAGCTGTAGAAGTTGACAGTCCTAAACTGGTCTCCCAGTGGGATCAAATAGCTGAGTGCCCTGATAGCACTTGTGCTCAAGTTGTTCATTCCAATGCTGAAATATGTGGGAACAAGGTGGTTCCTCTGGCCACAAAGGAGTGTTCAGAACAGAAGGAACAAATTGTCAAAACTGCAGGTTCAAAACGTAGCAACGCACTTGATGCAGGCCCCTCTAAATTCAGTGAGCAAATTAATAGAGGACAACTGGATCTTAATTGTGAGAATCAATCTATCAAGCTAAGGTGCAAAGGTCTTTCATTGTCTGATGCCATTACTAGCACATCTAATTCTCAGATGCATAGTGGAGAATTTGAAGCCCTAAATAGAAGGCCCAATTCCTCAGATATAGAAAATAAAGGTACTAATAATGATGAAGAGTTGCCATCTCTTGAGCTCAGTTTAAAGAGGCTTAGAGGAGTTAAAGATGCTGGTATTACAATTCAGGATGAACGGAATGTTTTAAGACGTTCTGATCAGTCTGCTTTCTCTAGGTATAATGCAGCCTCTAACACTAAGAAGTCTCCCACTGGCTGTGTTGGAAGCAATTCTCCACATAATAATAGCTTAGAAGTTACAAGGAAAGATTCATCTCGTTACATTCAATCTCATTCTAGTGGCAATCCTCCTAACCAGAGCTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACTAATAATGCTGTTACTAAATCTGCAGTTATAAGTGAGCTAGCGGTGGTATCAACAACTAAATGTTTGTACCAAACATCTGCTTTCCAGTCTGTAAAGAACAACCTCATGGGTACCTCTCAACAAGTTGTCTTACATAATACTGAAGATATGACAACAACGATGCTGGCACCACATAAAGTGGACACTCATAAAGATTCTGCTACTCAGGACTTCCATTGCCGTTATGAAAACCATAAATGTATTGCTAATAACATGCAGCACCAACTGCAACCTGATCATGATGCTGAATCTTTAAAGAAAATGGCTCTTGCTGCTTCTCATTGTGGGTCATCGAATGTGGTTGAAGTGCTAGTTGAAGGTAATATTGGAAATTACAGTATCAATAGAAGTGCTTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACAGCAGTTAATGCGGGGGGAACAAACATGGAAAGCAACAATGGACTCGCTGGGAATAGTGGCAGCGTTGATGCCAGTGGGAGTGGGAGTGGAAGTGCCAATAGAGTGGATCAAAACAAGACTTCTCAAAGGGAAGCAGCCCTAACTAAATTTCGGCAGAAGAGAAAGAGGAGAGAGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAGAGCAGAAAGAAACTCGCTGAACAACGACCTCGATTTCGTGGACAATTTGTGCGACAGTCCTCAAATGAAAATGCAAGTGAGGCAACAGATAGCTGA 2385 0.4222 MASSECSELCQRFSIKTTKHHRFWFWMFMFKERGVQMSVDGDSKELSELSQQLRDGKKTFKEGVAGAEEHSLCEDDEVKCNGVAEEVKVGQGGNVDSPSVQQHIPQQQPQGAMICWERFLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLSGIGLLYKIMSHKTRQNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQSQKSVKSKSLEKSDNNSGSNNVDDNGSIGLNNGDGSDNGSGTQSSWTKQAVEVDSPKLVSQWDQIAECPDSTCAQVVHSNAEICGNKVVPLATKECSEQKEQIVKTAGSKRSNALDAGPSKFSEQINRGQLDLNCENQSIKLRCKGLSLSDAITSTSNSQMHSGEFEALNRRPNSSDIENKGTNNDEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDQSAFSRYNAASNTKKSPTGCVGSNSPHNNSLEVTRKDSSRYIQSHSSGNPPNQSSNGASNNIDMGSTTNNAVTKSAVISELAVVSTTKCLYQTSAFQSVKNNLMGTSQQVVLHNTEDMTTTMLAPHKVDTHKDSATQDFHCRYENHKCIANNMQHQLQPDHDAESLKKMALAASHCGSSNVVEVLVEGNIGNYSINRSASGSNNGSNGQNGSSTAVNAGGTNMESNNGLAGNSGSVDASGSGSGSANRVDQNKTSQREAALTKFRQKRKRREERCFHKKVRYQSRKKLAEQRPRFRGQFVRQSSNENASEATDS* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01086 794 MobiDBLite consensus disorder prediction 416 440 - -
Rops6g01086 794 ProSiteProfiles CCT domain profile. 740 782 IPR010402 GO:0005515
Rops6g01086 794 MobiDBLite consensus disorder prediction 680 794 - -
Rops6g01086 794 Gene3D - 124 280 - -
Rops6g01086 794 ProSiteProfiles Response regulatory domain profile. 126 244 IPR001789 GO:0000160
Rops6g01086 794 Pfam CCT motif 737 782 IPR010402 GO:0005515
Rops6g01086 794 PANTHER TWO-COMPONENT RESPONSE REGULATOR 125 420 IPR045279 GO:0009736
Rops6g01086 794 MobiDBLite consensus disorder prediction 480 546 - -
Rops6g01086 794 SMART REC_2 125 240 IPR001789 GO:0000160
Rops6g01086 794 MobiDBLite consensus disorder prediction 680 739 - -
Rops6g01086 794 MobiDBLite consensus disorder prediction 249 308 - -
Rops6g01086 794 FunFam Two-component response regulator-like PRR37 125 283 - -
Rops6g01086 794 Pfam Response regulator receiver domain 127 238 IPR001789 GO:0000160
Rops6g01086 794 SUPERFAMILY CheY-like 123 249 IPR011006 -
Rops6g01086 794 MobiDBLite consensus disorder prediction 479 546 - -
Rops6g01086 794 MobiDBLite consensus disorder prediction 416 448 - -
Rops6g01086 794 CDD psREC_PRR 127 230 - -
Rops6g01086 794 MobiDBLite consensus disorder prediction 747 765 - -
Rops6g01086 794 MobiDBLite consensus disorder prediction 777 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01086 Rops-Chr6 25375666 25396561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01086 201 784 Response Regulator Gene Family AT5G02810 46.880 1.60e-114 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Rops6g01086 Response_reg 1.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01086 K12129 - gmx:100806454 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01086 6 25375666 25396561 Rops6g01086 6 25375666 25396561 ECH