Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01062 ATGGCTGATCCTTCCTTCGAAAACATGGGAAATGTGATTAAGGATCCTGATGCAAAAGGATTCAACCCTGGATTAATTGTTCTCCTGGTTGTTGGTGGGTTGCTGTTGATATTCCTTGTTGGAAATTATGTACTCTACTCATATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAACCAATCTCCAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGTGTCTCTGCACCTGGAGAGTAG 243 0.4239 MADPSFENMGNVIKDPDAKGFNPGLIVLLVVGGLLLIFLVGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQGVSAPGE* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01062 80 MobiDBLite consensus disorder prediction 56 70 - -
Rops6g01062 80 PANTHER DNA-BINDING PROTEIN S1FA2 5 80 IPR006779 GO:0003677|GO:0005634|GO:0006355
Rops6g01062 80 MobiDBLite consensus disorder prediction 55 80 - -
Rops6g01062 80 Pfam DNA binding protein S1FA 17 80 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01062 Rops-Chr6 25047799 25049546 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Rops6g01062 S1FA 1.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01062 - - vvi:100248443 122.479