Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01060 ATGGATGCCACCACCACCCGCAAGCCTCCTTCTAATATCCGTTTCCTCCTTCTATTGCTTCTCTTACATTTTAATTGGGGTAAAAGCCAACTTCAGCTGAACTACTATTCCAATAGCTGTCCAAAAGCTGAAGAGATCATCAAGCAACAAGTCAACAAGCATGGATACGCAGCCGTTTCGTGGGTTAGAAACCTCTTCCATGATTGCATGGTCAAGTCATGCGATGCATCCCTACTGTTAGCGACGGTGCACGGTGGTGTGGTGTCGGAGCAGACGTCGGAAAGAAGTTTTGGGATGAGAAACTTCAAGTACGTAAACACCATCAAAGCAGCTGTTGAGAAAGAATGCCCCTTGACAGTGTCATGCGCTGACATTGTTGCTCTTTCTGCTAAAGATGGCATTGCATTGTTGGGAGGTCCAAACATAGAGATGAAGACTGGGCGAAGGGACAGCAAAGAAAGCTATGCAACAGTGGTGGAAGACTTCATTCCAAACCATAATGACTCGATGTCCTTAGTGCTTTCTCGTTTTGAAGCCATTGGCATTGATGTTGAAGCCACGGTTGCTCTTTTAGGAGCACACTCAGTGGGAAGAGTTCACTGCTTGAATATGGTGCACAGGCTATACCCTACTGTGGATGAAACATTGGACCCTACACATGCTGAGTACCTGAAACGTAGGTGCCCAACACCAAATCCTGATCCAAAGGCTGTCCAATATTCGAGGAACGACCTTGAAACTCCCATGATCATTGACAACAACTACTACAAGAACATATTGCAACACAAGGGCTTGCTCACTGTGGATGAAGAACTGGCCACTGACCCTAGAACCTCACCTTATGTACAAAAAATGGCAGATGACAATGAATATTTCCATGAACAATTCTCAAGGGCCATTCTCTTGTTATCAGAGAACAATCCTCTAACTGGAGATCAAGGTGAAATCAGAAAGGATTGTCGCTATGTCAATGCCAATTAG 981 0.4506 MDATTTRKPPSNIRFLLLLLLLHFNWGKSQLQLNYYSNSCPKAEEIIKQQVNKHGYAAVSWVRNLFHDCMVKSCDASLLLATVHGGVVSEQTSERSFGMRNFKYVNTIKAAVEKECPLTVSCADIVALSAKDGIALLGGPNIEMKTGRRDSKESYATVVEDFIPNHNDSMSLVLSRFEAIGIDVEATVALLGAHSVGRVHCLNMVHRLYPTVDETLDPTHAEYLKRRCPTPNPDPKAVQYSRNDLETPMIIDNNYYKNILQHKGLLTVDEELATDPRTSPYVQKMADDNEYFHEQFSRAILLLSENNPLTGDQGEIRKDCRYVNAN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01060 326 SUPERFAMILY Heme-dependent peroxidases 30 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 Gene3D Peroxidase, domain 2 164 303 - -
Rops6g01060 326 PANTHER - 15 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 CDD secretory_peroxidase 30 323 IPR033905 GO:0004601|GO:0042744
Rops6g01060 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 FunFam Peroxidase 34 171 - -
Rops6g01060 326 ProSiteProfiles Plant heme peroxidase family profile. 30 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 FunFam Peroxidase 164 303 - -
Rops6g01060 326 Gene3D - 34 324 - -
Rops6g01060 326 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01060 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01060 Rops-Chr6 25011740 25014593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01060 33 324 Peroxidase AT2G37130 75.084 8.63e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01060 K00430 - gmx:100785485 550.051