Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01056 ATGGTTGCCACCACCACCTGCAAGCCTCCTTCTTATATTTGTTTCCTCCTTCTATTGCTTCTCTTACATTTTAGTTTGGGTAAAAGCCAACTTCAGCTGAACTACTATTCCAATAGCTGTCCAAAAGCTGAAGAGATCATCAAGCAACAAGTCACCCAGCTGTATAACAAGCATGGAAACACAGCCGTTTCGTGGATTAGAAATCTCTTCCATGATTGCTTGGTCAAGTCATGCGATGCTTCCCTATTGTTAGCGACAGTGCGCGATGGTGTGGTGTCGGAGCAGACGTCGGAGAGAAGTTTTGGGATGAGAAACTTAAAGTACGTGAACAGCATCAAAGCAGCTGTTGAGGAAGCATGCCCCTTGACAGTGTCATGTGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGCATTGTTGGGAGGTCCAAACATAGAGATGAAAACTGGGCGAAGGGACAGCAAAGAAAGCTATGCAACAGTGGTGGAAGACTTTATTCCAAACCATAATGACTCCATGTCCTTAGTGCTTTCTCGTTTTGAAGCCATTGGCATTGATGTTGAAGCCACAGTTGCTCTTTTAGGAGCACACTCAGTGGGAAGAGTTCACTGCTTGAATATGGTGCACAGGCTATACCCTACTGTGGATGAAACGTTGGACCCTGCACATGCTGAGTACCTGAAACGTAGGTGCCCAACACCAAATCCTAATCCAAAGGCTGTCCAATATTCGAGGAACGACCTTAAAACTCCCATGATCATTGACAACAACTACTACAAGAACATATTGCAACACAAGGGCTTGCTCACTGTGGATGAAGAACTGGCCACTGACCCTAGAACCTCACCTTATGTACAAAAAATGGCAGATGACAATGAATATTTCCATGAACAATTCTCAAGGGCCATTCACTTGTTATCAGAGAACAATCCTCTAACTGGAGATCAAGGTGAAATCAGAAAGGATTGTCGCTATGTCAATGCCAATTAG 993 0.4431 MVATTTCKPPSYICFLLLLLLLHFSLGKSQLQLNYYSNSCPKAEEIIKQQVTQLYNKHGNTAVSWIRNLFHDCLVKSCDASLLLATVRDGVVSEQTSERSFGMRNLKYVNSIKAAVEEACPLTVSCADIVALSARDGIALLGGPNIEMKTGRRDSKESYATVVEDFIPNHNDSMSLVLSRFEAIGIDVEATVALLGAHSVGRVHCLNMVHRLYPTVDETLDPAHAEYLKRRCPTPNPNPKAVQYSRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTSPYVQKMADDNEYFHEQFSRAIHLLSENNPLTGDQGEIRKDCRYVNAN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01056 330 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 Gene3D - 34 328 - -
Rops6g01056 330 FunFam Peroxidase 34 175 - -
Rops6g01056 330 FunFam Peroxidase 168 307 - -
Rops6g01056 330 SUPERFAMILY Heme-dependent peroxidases 30 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 Gene3D Peroxidase, domain 2 168 307 - -
Rops6g01056 330 Pfam Peroxidase 48 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 CDD secretory_peroxidase 30 327 IPR033905 GO:0004601|GO:0042744
Rops6g01056 330 PANTHER - 15 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g01056 330 ProSiteProfiles Plant heme peroxidase family profile. 30 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01056 Rops-Chr6 24935537 24946324 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01056 33 328 Peroxidase AT2G37130 75.421 7.32e-171 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01056 K00430 - gmx:100785485 568.155