Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01046 ATGGAAAAGGAAATCAAGTTCTTAGCATCCTGTGTTGAGTTTGCACCAGCACCAGTGATTCCCCTCAGAAAGGTTTCACATGCTCCTCTATTGGAAACCATTGCTGAAGAAGAAGCTGAAGAATATGATGAAGAGCAAGATTTTACAACCACAATTGCAGGGCAACATAAAGAGTATGCAGTTCCACAATCGACTGAAAGTTTTTGTGGTCAATTTGTGTTTCTATTGGATTGGGTGAAGAGACTTAAGTTAAGACGCAAAACATGTGAACAAATCGCTGGTGCTGTTTTTTCTTTGACACAGCAGTTTCTGTCTCTCCTATTTCCTCTGAATCTATTCACTCCCGATAGAATGGCATCCAATAGGGGTCAAGGTGGTATTCAGCAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCAAAAAATGAAAAATCGGTTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGGTTGCTGAATACCGAGCTAAGCTAGAGGCTGAGTTTCAAAAGAAAGTGTCAGATAGTAGTGGAGATTCTGGAGCTAATGTCAAGAGGCTTGAGCAAGAGACTGAAGGAAAAATCCATCACCTGAAAACAGAGGCTGCAAGAATATCGGATGATGTTGTCGCCATGCTCCTTAAGTATGTAACAAGTGTGAAAAATTAG 684 0.4152 MEKEIKFLASCVEFAPAPVIPLRKVSHAPLLETIAEEEAEEYDEEQDFTTTIAGQHKEYAVPQSTESFCGQFVFLLDWVKRLKLRRKTCEQIAGAVFSLTQQFLSLLFPLNLFTPDRMASNRGQGGIQQLLAAEQEAQRIVNAAKNEKSVRLKQAKEEAEKEVAEYRAKLEAEFQKKVSDSSGDSGANVKRLEQETEGKIHHLKTEAARISDDVVAMLLKYVTSVKN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01046 227 Pfam Vacuolar (H+)-ATPase G subunit 124 226 IPR005124 GO:0016471|GO:0046961|GO:1902600
Rops6g01046 227 FunFam V-type proton ATPase subunit G 120 227 - -
Rops6g01046 227 Gene3D - 117 227 - -
Rops6g01046 227 Coils Coil 127 176 - -
Rops6g01046 227 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 118 227 IPR005124 GO:0016471|GO:0046961|GO:1902600
Rops6g01046 227 NCBIfam V-type ATPase subunit G 123 226 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01046 Rops-Chr6 24741203 24746235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01046 125 227 Primary Pumps ATPases(2) AT4G23710 68.932 6.75e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01046 K02152 - gmx:100306550 190.274