Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01028 ATGGGGAGTCAAATCAAAACTTGTGCTGCTTCCGAGTATTGTTGTCAATGGTCTTTGTGGTCTTCCTTGCATGAAAGTTGCTCAATTCCAAGTGATGTTCCAAAGGGTCACATGGTTGTTTATGTAGGTGAGAATCACAAGAGATATGTGATCAAGATTGCATTGCTTCATCATCCACTCTTCAGGGCCTTGTTGGATCAAGCTCAGGAAGAGTATGATTTCATTGCAGATGCAAAACTTTGTATTCCTAGTGATGAGAATCTCTTCCTCAATGTCATTCGTTGTGCTAGCTCCCCACAGAACCAAAGGGTGTGTCTCTGTCTTTGA 327 0.422 MGSQIKTCAASEYCCQWSLWSSLHESCSIPSDVPKGHMVVYVGENHKRYVIKIALLHHPLFRALLDQAQEEYDFIADAKLCIPSDENLFLNVIRCASSPQNQRVCLCL* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01028 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 91 IPR003676 GO:0009733
Rops6g01028 108 Pfam Auxin responsive protein 26 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01028 Rops-Chr6 24367511 24367837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01028 16 103 Calmodulin-binding Proteins AT4G34750 46.237 6.11e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01028 K14488 - gmx:100812927 186.037