Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01018 ATGGAGCCTTGGGAAACAATCTATGATCTGAAATCTAAAATTGAAGACAAGTATGGCCTGTGTGTTCATAGGCAACGCCTCTGGTTTCAAGGGAATGAGTTGAAAAATGATAATAGAATTGTATCCTATGGCTTCCGTTGTAATCAAACATTTCACCTCACTGTTGAGAAACTGCCACCAGATGTGAAACTACACATTTTGATTAAGCATCCTCAAGCTCGCGACAATGGATATGTGAGGGTGTGGGAGACAGCTAAGGTGAGTGACTTGCGCAGGAAAGTTGCGAAATATTGGTCAGTTACTCCAGAGAGTTTCACCCTCTTTCGTTTCAATATTGAAATGAAGGATGACTGTATTCTTCGTGAATATTATATCACGGAGGACTGTGAGATTAAGTTCTCTACCATAACGGAAGCTCGTATTCGTTATTGA 432 0.4051 MEPWETIYDLKSKIEDKYGLCVHRQRLWFQGNELKNDNRIVSYGFRCNQTFHLTVEKLPPDVKLHILIKHPQARDNGYVRVWETAKVSDLRRKVAKYWSVTPESFTLFRFNIEMKDDCILREYYITEDCEIKFSTITEARIRY* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01018 143 Pfam Ubiquitin family 2 56 IPR000626 GO:0005515
Rops6g01018 143 CDD Ubl_ubiquitin_like 5 53 - -
Rops6g01018 143 CDD Ubl_ubiquitin_like 83 131 - -
Rops6g01018 143 Gene3D - 58 137 - -
Rops6g01018 143 SUPERFAMILY Ubiquitin-like 2 59 IPR029071 -
Rops6g01018 143 PANTHER UV EXCISION REPAIR PROTEIN RAD23 1 57 - -
Rops6g01018 143 SUPERFAMILY Ubiquitin-like 66 131 IPR029071 -
Rops6g01018 143 ProSiteProfiles Ubiquitin domain profile. 1 60 IPR000626 GO:0005515
Rops6g01018 143 Gene3D - 1 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01018 1 55 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 34.545 3.99e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01018 - K08770 pcin:129302080 112.849