Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01012 ATGTTTAGAACTTTTGTTGGGAAAATACAAAAGGGTCTTTCACTCTTTGTACACAGAAGGCCTGCACTCAGCTACTTCAATGAAGAGCTTATGGAGGCCACAAGTGTGGTGCCCGATGATGTTATAGAAGGATATTTTGCTGTTCTTGCAATCAAAGGTGGAGAAACCAAAAGGTTCATTATTGAATTATACTACTTGACTGATCCTGAATTCATTGGACTGCTGGACAAAGCACAGGAAGAGTATGGTTTCATGCAGAAGGGAACTCTTGCAGTCCCTTGTTTGCCTCGAGAATTACAGAAGATTCTAGAAGGTCCAAGAGCATAA 327 0.4098 MFRTFVGKIQKGLSLFVHRRPALSYFNEELMEATSVVPDDVIEGYFAVLAIKGGETKRFIIELYYLTDPEFIGLLDKAQEEYGFMQKGTLAVPCLPRELQKILEGPRA* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01012 108 Pfam Auxin responsive protein 35 103 IPR003676 GO:0009733
Rops6g01012 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01012 Rops-Chr6 24171566 24171892 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01012 27 94 Calmodulin-binding Proteins AT3G43120 44.118 1.34e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01012 - K14488 gmx:100791766 152.14