Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01010 ATGTTTAGGTCTTTTGTTGGGAAGATGCAAAAGGGTCTTTCACTCTTTGCACACACAAGGCCCACACTCAGCTACTTCAATGAAGAGATAGTGGAGGCTACAAGTGTGGTGCCTGATGATGTTAGGGAAGGATATTTTGTTGTTCTTGCAATCAAAGATGGAGAAACCAAAAGGTTCATTGTTGAATTAGACTACTTGACTGATCCTTCATTCATTGGACTGCTGGACAAAGCACAGGAAGAGTATGGTTTCGTGCAGAAGGGAGCTCTTGCAATTCCTTGTTGGCCTCAAGAATTACAGAAGATTCTAGATGGTCGAAGAGCCTAG 327 0.4281 MFRSFVGKMQKGLSLFAHTRPTLSYFNEEIVEATSVVPDDVREGYFVVLAIKDGETKRFIVELDYLTDPSFIGLLDKAQEEYGFVQKGALAIPCWPQELQKILDGRRA* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01010 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 102 IPR003676 GO:0009733
Rops6g01010 108 Pfam Auxin responsive protein 35 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01010 Rops-Chr6 24149919 24150341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01010 27 94 Calmodulin-binding Proteins AT3G43120 42.647 1.57e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01010 - K14488 gmx:100791766 154.836