Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01008 ATGTTTAGATCTTTTGTTGGGAAGGTGCAAAAGGGTCTTTCACTCTTTGTACACAGAGGGCCTGCACTCAGCTACGTGGAGGCTACAAGTGTGGTGCCAGATGATGTTATGGAAGGATATTTTGCTGTTGTTGCAATCAAAGGTGGAGAAACCAAAAGGTTCATTATTGAATTAGACTACTTGACTGATCCTGAATTCATTGGACTGCTGGACAAATCACAGGAAGAGTATGGTTTCGTGCAGACGGGAACTCTTGCAGTCCCTTGTTTGCCTCGAGAATTACAGAAGATTCTAGATGATCGGAGAGCATAG 312 0.4359 MFRSFVGKVQKGLSLFVHRGPALSYVEATSVVPDDVMEGYFAVVAIKGGETKRFIIELDYLTDPEFIGLLDKSQEEYGFVQTGTLAVPCLPRELQKILDDRRA* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01008 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 97 IPR003676 GO:0009733
Rops6g01008 103 Pfam Auxin responsive protein 30 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01008 Rops-Chr6 24124302 24124613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01008 33 89 Calmodulin-binding Proteins AT3G43120 47.368 6.70e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01008 - K14488 gmx:100791766 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01008 6 24124302 24124613 Rops6g01008 6 24124302 24124613 ECH