Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01000 ATGCTGACTCACCGGAACTTCATGGCGGCGGTTGCGGCTGGTACGGCTGATCAAGACCGGTACGGCGAGGGGAAGAACGTGTTCCTGTGCTTCGTGCCGATGTATCATGTGCTCGGGCTTTCGACTATTACGTACACGCAGCTGCGATGGGGGAACACGGTGGTGTCGATGGTGAGGTTTGATCTGGAGAAGGCTCTGGCGGCGGTGGAGAAGTTTCGGGTAACGTATTTATACGTTGCTCCGCCGGTGATGATGGAGATGGCAAAACGACGTGATGTGGTGAACGCGTACGACTTGTCGTCGCTGAAGCAGGTAGGGAGTGGTGTTGCACCGTTGGGGAGAGATGTGATGCAAGAGTGTGCTAAGGTTCTACCCCAGGTTGAAATCATTCAGGCTATGTTTGGATTGGTGGTATGGGATGGAATGGGATGGGATGGGGTGGGATGA 447 0.5481 MLTHRNFMAAVAAGTADQDRYGEGKNVFLCFVPMYHVLGLSTITYTQLRWGNTVVSMVRFDLEKALAAVEKFRVTYLYVAPPVMMEMAKRRDVVNAYDLSSLKQVGSGVAPLGRDVMQECAKVLPQVEIIQAMFGLVVWDGMGWDGVG* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01000 148 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 136 - -
Rops6g01000 148 Pfam AMP-binding enzyme 1 135 IPR000873 -
Rops6g01000 148 Gene3D - 1 136 - -
Rops6g01000 148 SUPERFAMILY Acetyl-CoA synthetase-like 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01000 Rops-Chr6 23945501 23946037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01000 2 132 Monolignol Biosynthesis Gene Families AT4G05160 54.962 1.18e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01000 K01904 - psat:127097095 201.06