Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00999 ATGGCGAAATGCTTTGATCTCAAAACGATGACGTATTACTCACCCAGGCGACCCATTCACCTTCCCTCTGATCCCAACCTTTCCCTCACCTCATTCCTCTTCCAAAGCACTTCGTCCACCGGCGCCGCCCTCGCCCTCGCCGATGCTGATTCCGGCGACTCCCTCACTTTCCAAGACCTCAAAACCCATGTCTCCGCCCTCTCTCGCTCCTTGCTTCGCCTCGGAACCCGACGAGGTGACGTCGTTTTGCTTTTCGCTCCAAACTCCATACGCTTCCCCTTGTGCTTCCTCGCCGTCGTTTCCATCGGTTCCATCGTCACCACCTGCAGCCCCTTATACACCGTCTCTGAACTCTCCACCCAAGTTTACGACTCCAAACCCAAGCTCGTCATTACCGTATCGGAACTCGTTCACAAAATCGAAGCCTTAACCTTGAATTTACCATGCATTTTGCTTGATGATCCTTCGAATAGTGTAAATTCGTCGAGGACATTTGCTACTAGAATTCGGTATTTCGCTGATTTGAATCGGAGAGTCGGACGGGAGCTCCGATGA 555 0.5207 MAKCFDLKTMTYYSPRRPIHLPSDPNLSLTSFLFQSTSSTGAALALADADSGDSLTFQDLKTHVSALSRSLLRLGTRRGDVVLLFAPNSIRFPLCFLAVVSIGSIVTTCSPLYTVSELSTQVYDSKPKLVITVSELVHKIEALTLNLPCILLDDPSNSVNSSRTFATRIRYFADLNRRVGRELR* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00999 184 SUPERFAMILY Acetyl-CoA synthetase-like 15 156 - -
Rops6g00999 184 Gene3D - 12 178 IPR042099 -
Rops6g00999 184 Pfam AMP-binding enzyme 39 144 IPR000873 -
Rops6g00999 184 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 156 - -
Rops6g00999 184 ProSitePatterns EF-hand calcium-binding domain. 48 60 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00999 Rops-Chr6 23944861 23945415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00999 12 152 Monolignol Biosynthesis Gene Families AT4G05160 54.610 9.54e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00999 K01904 - psat:127097095 231.106