Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00986 ATGGTCTTTGCCTCTTGTCTAATCATGTCCGTTTCAGGAGCTACCTACATGTTCGGTTTATACTCTAATGAAGTAAAAACCACTTTAGGTTATGATCAGTCCACTCTTAACTTGATCAGCTTCTTCAAAGACATTGGCACCAATTTTGGTATTCTCTCAGGGTTAATCAATGAGGTTAGCCCTCCATGGGTGATACTAGCCATGGGTGCCACTATGAACTTCATTGGTTACTTCATGGTATGGCTTTCTATCACTGGACACACTGCCAAACCCAAAGTTTGGCAAATGTGTCTCTACTTTTACATTGGTGCTAATTCACAAGCTTTTGCCAACACTGGTGCTTTGGTCAATTGTGTCAAAAGCTTCCCAAGAAGCCGTGGCAGTGTTATTGGACTGCTCAAGGGTTATATGGGTCTAAGTGGTGCCATTTTCACACAATTCTATCATGCCTTTTATGGTGACAATATTAAAGCTCTTATCTTTTTCATTGGTTGGCTTCCTGCTGCTATTTCCTTCATTTTCCTTCCAGCAATTCGGGTATTGAACACAATACCACAACCCAAGGAGGTCAAAGTTTTTTACAAACTTCTATATATGTCACTTGGTGTTGCTGGGTTCCTCATGGTATTGATCATCATACAGAATAAGTTGAGTTTTACTAGGATTGAGTATGCTGTGGATGGCATGGTGCTTCTTTTCTTGCTCCTTCTCCCACTTCTTGTGGTGGTTGAAGAGGAGTTCAAACTCTTGAAGACTCAAAACCAAACCTTTGATGCAGATGTGAAAGTATTCACTGAAGTTCCACCTTCAGTCATGGAATTGCAACAGCCAGAATCACATGCAGCACCACCAGCTACCACAATCCCACAAAGGAAAATTTCTTGGTTTAGCAACATATTCAATCCCCCCAAAAGGGGTGAGGACTACACCATCTTACAAGCACTTTTCAGCATTGACATGTGGATTCTGTTCATTTCAACAACATTTGGTATTGGTGGAACATTGACAGCACTTGACAATTTGGGACAGATTGGTAACTCATTGGGGTACCCCAGAAAGAGCCTCACCACCTTTGTGTCCCTTGTGAGTATATGGAACTATCTGGGAAGAGCAGTGGCTGGTTTTGCCTCTGAAATCTTCTTGACCAAATACAAATTCCCACGTCCCTTGATGCTCACTCTAGTCATGCTTCTCTCTTGTGTTGGCCATCTTTTAATAGCCTTTGGTGTCCCAAACTCTCTCTACTTTGCTTCTGTGATTGTTGGGTTTTGCTTTGGTGCTATGTGGCCCCTAATGTTTGCTATCATATCTGAATTATTTGGTCTCAAATACTACTCTACGTTATATAGTTTTGGAGCAGTGGCAAGCCCTGTTGGGTCTTACATATTGAATGTGAGAGTGACTGGTTCTTTGTATGATAAAGAGGCTTTGAAACAATTGGAGATGAAGGGACTCACAAGACAACCAGGGAAGGACTTAACTTGCTTGGGAGTACAATGTTATAGGATGGCTTTTATCATAATCACTGCATCAACTTTGGTTAGCTGTTTTATTTCCTTCATTTTGGTGTTGAGGACTAGGAAATTTTACAAGGGTGACATTTATGAAAAGTTCAGGGTGAAACTAGAGACATCAGAGACTCTTGCAACATTAAGCAGCAAGGCAGAAGCAGATAAAATCAATAGAAAATGA 1692 0.4108 MVFASCLIMSVSGATYMFGLYSNEVKTTLGYDQSTLNLISFFKDIGTNFGILSGLINEVSPPWVILAMGATMNFIGYFMVWLSITGHTAKPKVWQMCLYFYIGANSQAFANTGALVNCVKSFPRSRGSVIGLLKGYMGLSGAIFTQFYHAFYGDNIKALIFFIGWLPAAISFIFLPAIRVLNTIPQPKEVKVFYKLLYMSLGVAGFLMVLIIIQNKLSFTRIEYAVDGMVLLFLLLLPLLVVVEEEFKLLKTQNQTFDADVKVFTEVPPSVMELQQPESHAAPPATTIPQRKISWFSNIFNPPKRGEDYTILQALFSIDMWILFISTTFGIGGTLTALDNLGQIGNSLGYPRKSLTTFVSLVSIWNYLGRAVAGFASEIFLTKYKFPRPLMLTLVMLLSCVGHLLIAFGVPNSLYFASVIVGFCFGAMWPLMFAIISELFGLKYYSTLYSFGAVASPVGSYILNVRVTGSLYDKEALKQLEMKGLTRQPGKDLTCLGVQCYRMAFIIITASTLVSCFISFILVLRTRKFYKGDIYEKFRVKLETSETLATLSSKAEADKINRK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00986 563 CDD MFS_Mch1p_like 3 516 - -
Rops6g00986 563 FunFam Nodulin family protein 311 532 - -
Rops6g00986 563 SUPERFAMILY MFS general substrate transporter 3 532 IPR036259 -
Rops6g00986 563 Gene3D MFS general substrate transporter like domains 315 530 IPR036259 -
Rops6g00986 563 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 533 - -
Rops6g00986 563 Pfam Major Facilitator Superfamily 322 526 IPR011701 GO:0022857|GO:0055085
Rops6g00986 563 Pfam Nodulin-like 1 243 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00986 Rops-Chr6 23764978 23767064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00986 1 541 Nodulin-like Gene Family AT2G39210 62.018 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00986 - - gmx:100814000 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00986 6 23764978 23767064 Rops6g03342 6 57907161 57909067 ECH
Rops6g00986 6 23764978 23767064 Rops6g00986 6 23764978 23767064 ECH