Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00970 ATGGGTACATCACACTATGAAGGAGTTGATTCAGGTAACCACACGACCCACTCCTTTAGTACCTCTGCTAAAAAGGAAATTGTCCGTGATGTGAAGGAGAAACTAGCATATGTGGCCCTTGATTTTGAACAAGAAATGGAGACTACTAAGAGTATGGAGGCTCCTGGGATTCATGAAACCACATACAACTCTATCATGAAATGCGATGTTGATATTAGGAAGGGTCTGTATGGAAATATCGTACTTAGTGGTGGGTCTACTATGTTTCCTGGAATTGCGGATCGCATAAGCAAGGAAATTAGTGCTTTTGCTCCAAGCAGCATGAAAATCAAGGTGGTTGCACCTCCTGAAAGGTAG 357 0.4258 MGTSHYEGVDSGNHTTHSFSTSAKKEIVRDVKEKLAYVALDFEQEMETTKSMEAPGIHETTYNSIMKCDVDIRKGLYGNIVLSGGSTMFPGIADRISKEISAFAPSSMKIKVVAPPER* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00970 118 SUPERFAMILY Actin-like ATPase domain 16 118 IPR043129 -
Rops6g00970 118 Gene3D Actin; Chain A, domain 4 15 50 - -
Rops6g00970 118 FunFam Major actin 18 118 - -
Rops6g00970 118 Pfam Actin 47 116 IPR004000 -
Rops6g00970 118 MobiDBLite consensus disorder prediction 1 22 - -
Rops6g00970 118 Gene3D - 55 118 - -
Rops6g00970 118 MobiDBLite consensus disorder prediction 1 23 - -
Rops6g00970 118 PANTHER ACTIN 52 110 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00970 Rops-Chr6 23424511 23424867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00970 17 118 Cytoskeleton Gene Families AT5G09810 63.768 1.04e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00970 K10355 - gmx:100778206 171.4