Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00952 ATGGACACAATGTTGGTACCTCCATGGTTCAAGCGACTCCTAAACACACCCTTTTTCAATGTCTGTCGGATTCATGGGGATGCTGCAAGAAGCGAATGTAACATGTTTTGCTTAGATTGCAATGGAGATGCATTTTGCTTCTATTGCCGTTCCTCAAGACACAAGGATCACCAAGTTATTCAGATAAGGCGATCTTCTTATCACGATGTAGTGAGAGTGGCGGAAATTCAGAAGGTATTGGACATTAGTGGAGTGCAGACATACGTGATCAACAGTGCCAGAGTTCTGTTTCTGAATGAGAGGCCTCAACCAAAATCTGGAAAAGGGGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTAGACCCATTTCGCTTCTGTTCTTTGGGATGTAAGCTTGCAGGAATAAAGAGAAATGGGGATGCAAGCTTTGTTTTGGATTCTAACAATGAGGAGGGAATGTCAAGGAGATTAGTCTCTTCAAGACAACAACAAGACATGTATCCTGCCACTTCTCCTCCACCTGCTTCAAATGCAAGGAGAAGAAAAGGCATTCCTCACAGAGCTCCTTTTGGCTCCTAA 585 0.4359 MDTMLVPPWFKRLLNTPFFNVCRIHGDAARSECNMFCLDCNGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLAGIKRNGDASFVLDSNNEEGMSRRLVSSRQQQDMYPATSPPPASNARRRKGIPHRAPFGS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00952 194 MobiDBLite consensus disorder prediction 156 194 - -
Rops6g00952 194 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 192 - -
Rops6g00952 194 MobiDBLite consensus disorder prediction 156 173 - -
Rops6g00952 194 SUPERFAMILY B-box zinc-binding domain 20 64 - -
Rops6g00952 194 Pfam PLATZ transcription factor 63 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00952 Rops-Chr6 22941205 22942937 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops6g00952 PLATZ 9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00952 - - gmx:100809455 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03399 8 73056871 73058878 Rops6g00952 6 22941205 22942937 PCT